| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3275 |
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| Symbol | rpsA |
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| ID | 4898278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009050 |
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| Strand | - |
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| Start bp | 336251 |
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| End bp | 337936 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640113873 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_001045143 |
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| Protein GI | 126464030 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.62304 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCGCTA AAGCAACCAT GGAAGAATTC GAGGCCCTCC TGAACGAGAG CCTCCAGATC
GACACCCCCC AGGAGGGGTC GGTCGTGAAG GGCAAGGTCA TCGCCGTCGA AGCGGGCCAG
GCCATCATCG ACGTCGGCTA CAAGATGGAA GGCCGCGTCG ACCTGAAGGA ATTCGCCGAC
ATGTCGGGCT CGGTCGACAT CTCGGTCGGG GATGAGGTCG AGGTCTATCT CGACCGGGTC
GAGAATGCCC GTGGCGAGGC CGTCATCAGC CGTGACAAGG CCAAGCGCGA GGAAGCCTGG
GACCGTCTCG AGAAGGCCTA TGCCAACGAG ACCCGCGTCG AAGGCGCGAT CTTCGGCCGC
GTCAAGGGCG GCTTCACCGT CGATCTCGGC GGCGCCGTAG CCTTCCTGCC CGGCTCGCAG
GTCGATGTGC GCCCCGTGCG CGATGCGGGC CCGCTGATGG GCATGAAGCA GCCGTTCCAG
ATCCTGAAGA TGGACCGTCG CCGCGGCAAC ATCGTCGTGT CGCGTCGCGC CATCCTCGAA
GAGAGCCGCG CCGAACAGCG CGCCGAGGTC ATCTCGAACC TCTTCGAAGG CCAGACCGTT
GACGGCGTCG TCAAGAACAT CACCGAATAC GGTGCGTTCG TCGACCTCGG CGGCGTGGAC
GGCCTGCTGC ACGTCACCGA CATGGCGTGG CGCCGCGTGA ACCACCCCTC GGAGATCCTG
TCGATCGGCG AGACCGTGAA GGTCCAGGTC ATCAAGATCA ACAAGGAAAC CCACCGTATC
AGCCTGGGCA TGAAGCAGCT CCAGTCCGAT CCGTGGGATG CGGTGGAAAA AGCCTATCCG
ATCGGCTCGG TCCACAAGGG CCGCGTGACC AACATCACCG ACTACGGCGC GTTCGTCGAG
CTGGAGGCCG GTGTCGAGGG TCTGGTCCAC GTTTCGGAAA TGAGCTGGAC CAAGAAGAAC
GTGCACCCCG GCAAGATCGT CTCGACCTCG CAGGAGGTGG ACGTCATGGT GCTGGAAATC
GACAGCGCCA AGCGCCGCGT GTCGCTCGGT CTCAAGCAGA CCATGCGCAA CCCGTGGGAA
GTCTTTGCCG AAACCCACCC GGTCGGCACG CCGATCGAGG GCGAGGTCAA GAACATCACC
GAATTCGGTC TGTTCGTGGG TCTCGAGCAC GATATCGACG GCATGGTGCA CCTCTCGGAT
CTCAGCTGGG ATCAACGCGG CGAGGAAGCC ATCCAGAACT ACCGCAAGGG CGACGTCGTG
AAGGCGGTGG TGACCGAGGT CGACACCGAC AAGGAGCGGA TCTCGCTCTC GATCAAGGCG
CTCGGCGACG ACACCTTCTC GGAAGCCATC GAAGGCGTGA AGCGCGGCTC GGTCATCACC
GTGACCGTGA CGGCGATCGA GGACGGCGGC ATCGAGGTCG AATACAACTC GATGAAGTCG
TTCATCCGTC GTTCGGACCT GTCGCGCGAC CGCGCCGACC AGCGTCCGGA GCGGTTCCAG
GTGGGCGACA AGGTGGATGT CCGCGTGACC AACGTGGATG CCAAGACCCG TCGCCTCGGC
CTGTCGATCA AGGCGCGCGA GATCGCCGAA GAGAAGGAAG CCGTCGAACA GTACGGTTCG
TCCGATTCGG GCGCCTCGCT GGGCGACATC CTCGGCGCGG CGCTGCGCAA CAGCGATCGC
GGCTGA
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| Protein sequence | MCAKATMEEF EALLNESLQI DTPQEGSVVK GKVIAVEAGQ AIIDVGYKME GRVDLKEFAD
MSGSVDISVG DEVEVYLDRV ENARGEAVIS RDKAKREEAW DRLEKAYANE TRVEGAIFGR
VKGGFTVDLG GAVAFLPGSQ VDVRPVRDAG PLMGMKQPFQ ILKMDRRRGN IVVSRRAILE
ESRAEQRAEV ISNLFEGQTV DGVVKNITEY GAFVDLGGVD GLLHVTDMAW RRVNHPSEIL
SIGETVKVQV IKINKETHRI SLGMKQLQSD PWDAVEKAYP IGSVHKGRVT NITDYGAFVE
LEAGVEGLVH VSEMSWTKKN VHPGKIVSTS QEVDVMVLEI DSAKRRVSLG LKQTMRNPWE
VFAETHPVGT PIEGEVKNIT EFGLFVGLEH DIDGMVHLSD LSWDQRGEEA IQNYRKGDVV
KAVVTEVDTD KERISLSIKA LGDDTFSEAI EGVKRGSVIT VTVTAIEDGG IEVEYNSMKS
FIRRSDLSRD RADQRPERFQ VGDKVDVRVT NVDAKTRRLG LSIKAREIAE EKEAVEQYGS
SDSGASLGDI LGAALRNSDR G
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