| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3178 |
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| Symbol | |
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| ID | 4898763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009050 |
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| Strand | + |
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| Start bp | 206929 |
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| End bp | 208896 |
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| Gene Length | 1968 bp |
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| Protein Length | 655 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640113780 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase, NAD-binding |
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| Protein accession | YP_001045050 |
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| Protein GI | 126463937 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.21091 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAACG ACCTCATCCG GCGCAGCGAC TTCGACGGGA TCGCGCTTCT GACCCTCGCC
AACCCGCCGG TGAACGCCCT GGGCCTCGCG GTGCGCCAGA GGCTCACCGC GCTGACGGCC
GAGCTCGAGG CCGACGAAAG CGTGCGCGCC GTGGTGCTGA CGGCTGAGGG CCGGGTCTTC
GTCGGCGGCG CGGACATCGC CGAGTTCGAC CGCCCGCCCG AGGCGCCGCA CCTGCCCGAT
GTGATCGCCG CCATCGAGGC CTCGCGGAAG CCGTGGATCG CGGCGCTGAA CGGCGCGGCC
CTCGGCGGCG GGGCCGAGCT CGCGCTCGGC TGCCACTACC GGATCTTCGC GGATACCGCC
CGGCTGGGCC TGCCGGAGAC GAGCCTCGGC CTCATCCCCG GCGCGGGCGG CACGCAGCGC
CTGCCGCGCC GGATCGGCCT TGCTCCCGCC ATCGAGGTCA TCACCGCCGG CCGCACCCTG
TCGGCCGCCG AGGCGCGGGA GGCGGGCCTC GCGGACCGGA TCGCCGCGGG CGAGCTGATC
CCCGAGGCGC TGGCCTTCGC CCGCACCCTC GACGGCGCCC TGCCCCGGCC TGCCTCTGCG
GCCCCGCTCG CCGATCCCGG ACACGCCTTC TGGGACGAGG CCCGCGCGCG CATCGCCAGG
GCGGCCCGAG GCAATCCCGC GCCCACCGCG GCCCTCGAAG CGATCCGCGC GGGCGTGGCG
GAAGGCTTCG CCGCGGGCCT CCGTGCCGAG CGCGAGACCT TCCTGCGGCT CCGCGCTTCG
GACGAAGCCG CGGCCCTGCG CCATCTCTTC TTCGCCGAAC GTGCGGCCCT GCGCCCCGCC
GCCCTCCGCG GCATCGAGCC TGTGCCCCTC ACCCGCGCAG GCGTGATCGG CGGCGGCACG
ATGGGCAGCG GCATCGCCGC CGCCCTCGCC GCGGCCGGGC TGGAGGTGCG TCTCACTGAA
ACCGGGCCGG AGGCGCTCGC CGCCGGCCTC GAGCGGGTCG AGGCCATCTT CGAGGCGCAG
GTCAAGCGCG GGCTGACGGA TCGGGCCGGC GCGACGGAGC GGATGGCCCG CGTCACCGGC
ACGGTCGGTC TCGGCGCGCT GGCGGACTGC GATCTGGTGA TCGAGGCGGT CTTCGAGGAT
CTCGCCGTCA AGCGCCGGGT GTTCGAAGAG CTTGTCCGTC TCTGCGGGCC CGAGGCGATC
CTTGCCACCA ACACCTCCTA CCTCGATCCC GAACGGATCG TGGAGGGCCT GCCGCACCCC
CACCGCTTCA TCGCGCTGCA TTTCTTCAGC CCGGCGCAGG TGATGAAGCT CCTCGAGATC
GTACCGCTGG CCGCCACCGC GCCCCGCATT CTCGCCACCG GCGTCGCTCT GGCGGCACGG
CTCGGCAAGA TCCCGGTGCA GGCGGGCAAT GGCGAGGGTT TCATCGGCAA CCGCATCCTC
AAGCGCTACC GCGCCGAGGC CGAGGCTCTG CTGCTCGCGG GCGCCACCCC GACCGAGATC
GATGAGGCCA TGCGCGCCTT CGGCCTCGGC ATGGGTCCGT TCGAGATGCA GGACATGGCC
GGGCTCGACA TCGCCTTCCG CGCGCGGGAG GCCGCCCGCG CGCTCGGGCA GGACCTGCCC
GAAGGCCCCG GAGACCGGCT GGTGCGCGCA GGCCGCCTCG GCCGCAAGTC GGGCGGCGGC
TGGTACGACT ATGCGCCGGG CAGCCGCCTT CCCCAGCCGT CGCCGGAGGC AGCCGCTCTG
ATCGCGCCTC TGGTGACCCC CGGCGCGCGG CCGAGCGGCA CCGAGATCGC CGACCGTCTC
ATCGCCGCCA TGGCCGAGGA AGGCCAACGG ATCTGCGACG AGGGCCTCGC GCAGAGCCCC
TCGGACATCG ATCTGGTCGA GGTGCATGGC TACGGCTTCC CCCGTCACAA GGGGGGACCG
ATGTTTCACG CCGCGCGCAA GACCCGAAGC CGCACGAGCG GAGCATGA
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| Protein sequence | MTNDLIRRSD FDGIALLTLA NPPVNALGLA VRQRLTALTA ELEADESVRA VVLTAEGRVF
VGGADIAEFD RPPEAPHLPD VIAAIEASRK PWIAALNGAA LGGGAELALG CHYRIFADTA
RLGLPETSLG LIPGAGGTQR LPRRIGLAPA IEVITAGRTL SAAEAREAGL ADRIAAGELI
PEALAFARTL DGALPRPASA APLADPGHAF WDEARARIAR AARGNPAPTA ALEAIRAGVA
EGFAAGLRAE RETFLRLRAS DEAAALRHLF FAERAALRPA ALRGIEPVPL TRAGVIGGGT
MGSGIAAALA AAGLEVRLTE TGPEALAAGL ERVEAIFEAQ VKRGLTDRAG ATERMARVTG
TVGLGALADC DLVIEAVFED LAVKRRVFEE LVRLCGPEAI LATNTSYLDP ERIVEGLPHP
HRFIALHFFS PAQVMKLLEI VPLAATAPRI LATGVALAAR LGKIPVQAGN GEGFIGNRIL
KRYRAEAEAL LLAGATPTEI DEAMRAFGLG MGPFEMQDMA GLDIAFRARE AARALGQDLP
EGPGDRLVRA GRLGRKSGGG WYDYAPGSRL PQPSPEAAAL IAPLVTPGAR PSGTEIADRL
IAAMAEEGQR ICDEGLAQSP SDIDLVEVHG YGFPRHKGGP MFHAARKTRS RTSGA
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