Gene Rsph17029_3154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_3154 
Symbol 
ID4898620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand- 
Start bp178385 
End bp178993 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content68% 
IMG OID640113756 
Producthemolysin-type calcium-binding region 
Protein accessionYP_001045026 
Protein GI126463913 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0996816 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGCA TCAAGGGAAC CGCCCGGAAC GACATTCTGC AGGGCACGGA TGCCTGGGAC 
ATCATCTATG GCGGCAGCGG AAATGACCGG ATCTACGGCG GGGCCGGCAA TGACGAGCTG 
AAGGGCGGCT TCGGCAACGA CCGTCTGTGG GGCGGGACCG GACGGGACGA TCTCGAAGGC 
GGCAGCGGGG ACGACATCCT GTCGGGCGGC GCGGGCGACG ATGAGCTGGA GGGCGATGCC 
GGCAACGACC GGCTCTGGGG CGGCGCGGGC AACGACGAGC TCGAGGGCGG CTCCGGCGCG 
GACCGGCTCC ATGGCGGTTC GGGCAACGAC CGGCTCGACG GAGGGACGGG CAACGACGTG 
CTGACGGGCG GGGCGGGCCG CGATGTGTTC GAATTCGAGC GCGGCGATGG CCGGGACCGC 
ATCACCGACT TCACCAATGG CCAGGACCGG CTGGAGCTCG ACGATTTCAC CCGGATGCAG 
GTTCAGGCCG TGATCGACGA CGCGCGTCAG GTCGGCGGCA ACGTGGTTCT CACCCTGTCG 
GCGGACACGC AGGTCGTGCT CGAGAACATG AAGCTCGCGC AGTTGGACAT GTCCGACTTC 
CTGTTCTGA
 
Protein sequence
MARIKGTARN DILQGTDAWD IIYGGSGNDR IYGGAGNDEL KGGFGNDRLW GGTGRDDLEG 
GSGDDILSGG AGDDELEGDA GNDRLWGGAG NDELEGGSGA DRLHGGSGND RLDGGTGNDV 
LTGGAGRDVF EFERGDGRDR ITDFTNGQDR LELDDFTRMQ VQAVIDDARQ VGGNVVLTLS 
ADTQVVLENM KLAQLDMSDF LF