| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3129 |
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| Symbol | |
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| ID | 4899187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009050 |
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| Strand | + |
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| Start bp | 145058 |
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| End bp | 146386 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640113731 |
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| Product | hypothetical protein |
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| Protein accession | YP_001045001 |
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| Protein GI | 126463888 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3522] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03353] type VI secretion protein, VC_A0114 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000877531 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.24855 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGCA ACAGGGTGGT CTGGTCGGAA GGGCTCTTCC TCAGGACCCA GCACTTCCAG
CAGCAGGACC GGCACGCCGA GGCGCTGTTG CGCGCGGCGC TTCTTGCGGC GCCCTGGCAG
CCCTTCGGCT TCACGAGGCT CGCGCTCGAT GCGGCGGCGC TCGACGCAGG CCGCGTGGCG
CTCGCCGAGG CGGAGGCGCT GATGCCGGAC GGCACGGCCT TCCGCCTGGC CGAGGCCGAG
CCGCCGCCGG CCGCGGCGCT CCGCCGCGAC GGGCCGCCGG GCCTCGTCCA GCTGGCGCTG
CCGCTCGAAC AGGAGGGGGC GGCGAGTGTC GATCCCGCCC ATGCCGCACC TTCGGGGGCG
CGCTACCGCG GGCGGATCGA GGTGCTGCGC GATGCGATCC GCGGCGGCGC CGAGCCCGAG
GAGGTGGAGC TCGCGCGGCT CGCCCCGCGC CTGATCGCGC CGGGAGAGCC CGCGGACGGC
TGCGTGACGC TGCCCGTGGC GCGCGTCGAG GGGCTGCGCG CGGACGGATC GGTGGCCCTG
CAGGAGGGAT GGCTGCCCCC TGCCCTCACC ATCGGCGCCG TGCCGTGGTA TGGCGCGCTG
CTTCAGGAGC TGGTGACGGG GCTCGACCGG GTGGCCGATG CCCATGGCGG GCTCGTGCTG
GGCGGCGCCG GGCGCTCGAT CGAGAACCTG CTGATCCTCG AACTGGCCAA CACCGCGCGC
CCGCGCCTCG CCCACCTGCT CCAGCAGGCG CAGGAACATC CCTCGGCGCT CTATGCCGAG
CTGGCCGCGC TCGCCGGGCG GATGGCGACC TACGGCTCCT CCTCGCGCCG GCTGAGCGCG
CTTGCGCCCT ACGACCATCT CGAGCCGCAA CCGGCCTTCG CGGCTCTGGC CGACACGCTG
CGTTCGCTTC TTCTGTCGCT GCGCCATGTC GAGCCGAAGT CGCGCGCGCT GCCGGTGGCG
CGCCATGCGC AGAACATCTG GAAGGTCCGC ATCGACAATC CCGAGATCCT GCGCTCCTCG
CGCATCGTGC TGCGCGTGGG CTCGGAGATG TCGGACGAGA GCCTGCGCCG GCTCTTCGCC
GATCAGGCGA CGGTGGGCGC GGCCGATGCC TTCGAGCGGC TCTGGACCTC GCGCCTGCCG
GGCATCCCGC TGAAGCCGCT CCATTCCCAG CCGCGCGAGA TCCCCTACGA CGGCGAGCGG
CTCTGCCTCG AGCTCGATCA GAAATCCGAG CACTGGTCGC AGTTGCTCGA GGCGCCGGGC
TTCGTGGTGG GGGTTTCGGG CGTGCTCGAG CGCGAGCCGC AGATCGATTG CTATGCGGTG
AGCCGATGA
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| Protein sequence | MSGNRVVWSE GLFLRTQHFQ QQDRHAEALL RAALLAAPWQ PFGFTRLALD AAALDAGRVA
LAEAEALMPD GTAFRLAEAE PPPAAALRRD GPPGLVQLAL PLEQEGAASV DPAHAAPSGA
RYRGRIEVLR DAIRGGAEPE EVELARLAPR LIAPGEPADG CVTLPVARVE GLRADGSVAL
QEGWLPPALT IGAVPWYGAL LQELVTGLDR VADAHGGLVL GGAGRSIENL LILELANTAR
PRLAHLLQQA QEHPSALYAE LAALAGRMAT YGSSSRRLSA LAPYDHLEPQ PAFAALADTL
RSLLLSLRHV EPKSRALPVA RHAQNIWKVR IDNPEILRSS RIVLRVGSEM SDESLRRLFA
DQATVGAADA FERLWTSRLP GIPLKPLHSQ PREIPYDGER LCLELDQKSE HWSQLLEAPG
FVVGVSGVLE REPQIDCYAV SR
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