| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3096 |
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| Symbol | |
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| ID | 4899085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009050 |
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| Strand | - |
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| Start bp | 110806 |
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| End bp | 112107 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640113698 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_001044968 |
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| Protein GI | 126463855 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.109822 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.586288 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAAAGA TCATCGCCAC CCTGCTCGGC CTTCTCACGC TGCTTCTGGG CAGCGGCCTC
TGGATCGGCC TCGGGCTCAT CGGCACCGGC GTCGGGCTGC TTACGCTCTT CCGGCCGAAC
ATGCCCGGAC TCAAGCTGCT CGCGCAGCAG ACCTACAACG TCGTCGTCTC GCCCGAGCTG
CTCGCGCTGC CGCTCTTCAT CCTGATGGCC GAGATCCTCT TCCGCACGAA GATCTCCGAG
GCGCTGTTCA CCGGCCTCTC GCCCTGGCTG CGCCGGGTGC CGGGGCGGCT GTCGCACCTG
ACCGTGCTCG GCTGCACCAT GTTCGCCTCG GTCTGCGGCT CGTCTGCGGC GACCACGGCC
ACCGTGGGGC GCATCACCGC CAAGGAACTG ATCGACCGCG GCTACAACCG CGACCTCGTG
ACAGGCAGCC TTGCCGGGGC GGGGACGCTC GGCTTCCTGA TCCCGCCCTC GACCATCATG
ATCATCTACG GGGTGATGGC CGAGGAATCG ATCCTGCGGC TCTTCATCGC CGGCATCGTG
CCGGGGCTGA TGCTCGCGGC CTCCTACATG GGGTATCTCG CGGTCCGCTC GTGGCTCAAC
CCCGCGCTCG TGGGTGCGAC GCCCCCCCGC ACCAGCTTCC GCGAGAAGAT GGTGGCGCTG
AAGGATCTGG GGCCGCTCCT CCTCCTCATC GCGGGCGTCA TCGGCTCGAT GTACGGCGGG
ATCGCCTCGC CGACCGAGGC AGCTACCGTG GGCGTGGTCG TCTCGATGGT CATCGGCTTC
GCGCAGCGCA CGCTGACGCT GAGGGGCCTT CTGAGCGCCG CGCGTCAGGC GGCCGAAAGC
TGCGCCATGA TCGGCCTCAT CATGATCGGG GCGATGTTCC TATCGACGGT GATCGGCTAT
CTCGGCGTGC CGCGCTACAT CGCCACCGAG ATCCAGAGCT GGGGCATGTC GCCGCTGATG
CTCGTGGTGG TGCTGCTGAT CTTCTACGTC CTCCTCGGCA CGGTGATGGA GGGGCTTGGC
ATCATCGTGA TGACGCTGCC GATCACGCTG CCGCTGGCGG TGGCCGCGGG CTACGACAAG
GTGTGGTTCG GCATCTTCCT CGTGATCGTG GTCGAGATGG CCCAGATCAC GCCGCCGGTG
GGCTTCAACC TCACGGTGAT CCAGCGGCTG ACGGGGGACA GCATGGGGCG CATCACGCGC
GCAACGATGC CCTTCTTCCT CATCATGGCG GCCTTCGTGC TGCTCATCGC GGTCTTCCCG
GGCATCATCG GCTTCCTGCC GGACCTGATG CGCGGCAACT GA
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| Protein sequence | MGKIIATLLG LLTLLLGSGL WIGLGLIGTG VGLLTLFRPN MPGLKLLAQQ TYNVVVSPEL
LALPLFILMA EILFRTKISE ALFTGLSPWL RRVPGRLSHL TVLGCTMFAS VCGSSAATTA
TVGRITAKEL IDRGYNRDLV TGSLAGAGTL GFLIPPSTIM IIYGVMAEES ILRLFIAGIV
PGLMLAASYM GYLAVRSWLN PALVGATPPR TSFREKMVAL KDLGPLLLLI AGVIGSMYGG
IASPTEAATV GVVVSMVIGF AQRTLTLRGL LSAARQAAES CAMIGLIMIG AMFLSTVIGY
LGVPRYIATE IQSWGMSPLM LVVVLLIFYV LLGTVMEGLG IIVMTLPITL PLAVAAGYDK
VWFGIFLVIV VEMAQITPPV GFNLTVIQRL TGDSMGRITR ATMPFFLIMA AFVLLIAVFP
GIIGFLPDLM RGN
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