Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_3062 |
Symbol | |
ID | 4898967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009050 |
Strand | + |
Start bp | 73737 |
End bp | 75884 |
Gene Length | 2148 bp |
Protein Length | 715 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640113664 |
Product | TonB-dependent siderophore receptor |
Protein accession | YP_001044934 |
Protein GI | 126463821 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.173013 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCCCC GACACGCGGA CAGATCGCGC CTCCTCCTCC GTCATCCCTG CCTCAGGGCG CTCCTGATCG GAGGGTCGGC GCTGGTGGCC ATGCCCACAG GCCTCCGCGC CCAGGATGCG GCGGACGACG CGGCCGCGGG CGCCTTCCGC CTCTCGCCCA TCATCGTGGA TGCGGCCGCT GCGGCCGACG ACGATGCCAA TTCGGTCGTG GCGCAGGAGC TCTGGGTCGG CGGCAAGGTC GCGACCAGCC TGCTCGACAC GCCCGCCTCG GTATCGGTCG TGACCCAGGC CGAGATCCGG GCGCGCGCCG CCACCACCAC AGAGGAGGTG CTGCAATATT CCGCGGGCAT CGTCACCGAC TATTACGGCA GCGACGACCG CAACGACTAT TTCCTCGTCC GCGGCTTCCA GGCCTCGACC TACCGCGACG GGCTGACGCT GGGCTCGATG CGCGGCGTGC GCGAGGAGCC CTATGCCTAC CAGCGGATCG AGGTGCTGAA GGGCGCGAAC TCGACCCTGT TCGGCGTCTC CGATCCGGGC GGCTCGGTGA ATTTCGTGAC CAAGGTGCCG CAGTTCACCC GCTTCGGCGA GGTCTACGGC CAGATCGGCA CCAACGACCA CAAGGAACTC GGCTTCGATC TGGGCGACGT GCTGAACGAG CAGGGGACGC TCGCCTACCG CTTCACCGGC AAGGTGAAGG ACAGCGCGCT CGACTATGAC ACGTCGCGCG ACGACGACGC TTTCCTGATG GGCGGTCTCA CCTGGGCGCC GACCGAGGCC ACCACACTCA CGCTGGTCTA CGACCATCTG AAGCGCGACG GCACGCCGAA CAGCGGCGGC TATCCGCTCG ACCGCGAATA CGATCGCGGC GACTTCTTCG GCGAGGCCGA CTTCAACGAT CATGATGTCG AGCGCGACAC GCTGACGGCC ATGCTGCGCC ACGATTTCGG CGGCGGGCTG AGCCTGACCG CGAACCTGCG CTACAGCGAC CTGACCGACG ATTTCGGCTA TATCTACCTG TCGGATTCCG CCTCCCGCGT GGGCACCGAG CTCTCGCGCT TCTATTTCGG CACCGACAGC ACGGCCGAAG AGCTGATCGG CAACGCCATC CTGCAATATG ACACGAGCTT CGGCAGCACC GACAGCAGCA CGCTGGTCGG GATCGAGTAT CGCGACGCGG CGCTCTCCTC GGCCTCGTTC TACGGCGGAG CGGGCACCAT CGACATCGCG ACGGGGATCG CGACCGGCGT GCCCTCGAAC CTCGCGCCCT ACGAGACACG CAAGAGCGAT TACACAACGA AGTCGGTGTT CCTGCAGCAG AACCTGTCCT TCGCCGACCG GCTGGTGGCG ACCGTGGGCC TGCGGCACGA CTGGCTCGAC CTTAGGTCCC GCGGCACCGC TTCGGGCACG GTCTTCGACG ACAGCGACGA TTTCTCGGAG ACCTCGATCC GCGGTGCGCT GACCTACAAG GTCACCGACG AGGTCTCGGC CTATGCGAGC TATGTGGAAT CGGTGGCGCC GCCCTCCATC GGGGTCGAGC CCGAGCGCGG CGAGCAATAT GAGATCGGCG TGAAATACCA GCCCGCAGGC AGCCGGGCGC TCCTGTCGGC GGCGATCTTC GACCTGACCC GGCAGGACAT GACGATCCCG GTCGTTCTCG GCGACGGCAC CATCGTGCGC GAGGTGGTGG GCGAGACGCG CGTGCGCGGC TTCGAGATCG AGGGCAAGGC CGAGATCGCC GAGAACTGGG ACGTGATCGC GGCCTATTCC TATCAGGATG CCGAGCTCAC GCGGGCGGTG GTGCGCGGCA CCGACGTGTC GGGCAACCAG TTCGCCAACG TGCCGAAGAC CATGGCCTCG CTCTGGGTGA ACTACACCCT GCCGGGACGG GCGCGCGGCG GCGATATGAC CTTCGGCCTC GGCGCCCGCT ACATCGGCAG CTATCAGTTC GCCGAGACGA ACGCGACCGG CGAGAGCGAC GCCACCACGC TCTTCGATGC GGCCTTCAGC TACGACATCG CCGAGAACAC CGGCCTGTCC GTCAATGTGA GCAACCTCTT CGACGAGCAG CATGTCGTGG GCCGCGGCAC GGCCGACTAT TACAACCCGG GCCGCACCGT TACCGCCACG CTGCGCCGCA CCTGGTGA
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Protein sequence | MTPRHADRSR LLLRHPCLRA LLIGGSALVA MPTGLRAQDA ADDAAAGAFR LSPIIVDAAA AADDDANSVV AQELWVGGKV ATSLLDTPAS VSVVTQAEIR ARAATTTEEV LQYSAGIVTD YYGSDDRNDY FLVRGFQAST YRDGLTLGSM RGVREEPYAY QRIEVLKGAN STLFGVSDPG GSVNFVTKVP QFTRFGEVYG QIGTNDHKEL GFDLGDVLNE QGTLAYRFTG KVKDSALDYD TSRDDDAFLM GGLTWAPTEA TTLTLVYDHL KRDGTPNSGG YPLDREYDRG DFFGEADFND HDVERDTLTA MLRHDFGGGL SLTANLRYSD LTDDFGYIYL SDSASRVGTE LSRFYFGTDS TAEELIGNAI LQYDTSFGST DSSTLVGIEY RDAALSSASF YGGAGTIDIA TGIATGVPSN LAPYETRKSD YTTKSVFLQQ NLSFADRLVA TVGLRHDWLD LRSRGTASGT VFDDSDDFSE TSIRGALTYK VTDEVSAYAS YVESVAPPSI GVEPERGEQY EIGVKYQPAG SRALLSAAIF DLTRQDMTIP VVLGDGTIVR EVVGETRVRG FEIEGKAEIA ENWDVIAAYS YQDAELTRAV VRGTDVSGNQ FANVPKTMAS LWVNYTLPGR ARGGDMTFGL GARYIGSYQF AETNATGESD ATTLFDAAFS YDIAENTGLS VNVSNLFDEQ HVVGRGTADY YNPGRTVTAT LRRTW
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