Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_3048 |
Symbol | |
ID | 4898671 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009050 |
Strand | - |
Start bp | 59149 |
End bp | 59991 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640113650 |
Product | hypothetical protein |
Protein accession | YP_001044920 |
Protein GI | 126463807 |
COG category | [S] Function unknown |
COG ID | [COG1434] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.09156 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.289832 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCGGA ACCGCTTTCC TCCGACGCAG GCCCCGCCCA TGGACACGAT CTTCTTCATC GCCTCCAAGC TCGTCTGGAT GCTGGTCCGG CCCGAGACGC TGCTCGTCCT TGCCGTGGCG GCGGGTCTCT CAGCCCTCGT CCTGCGCCGC CTGCGTCTGG CGGCGACGCT GCTTCTGTCG AGCTGTCTGG TCTTCCTCGC GGTGGGAGCG CTTCCGCTGT CGTATCTGGC CCTCTCCTCG CTCGAGCGGG GCTGGCCCGC CGATCCGCCG GTGGGCGAGG TGGCGGGCAT CATCCTCCTC GGCGGCAGCG AGGATGCGGC CGCGGCGCGG AAGTGGCGGC GGCCCGCCGT GACCGAGGCG GGCGATCGCT ACCTCGCGAC CATCGCCCTC GCGCGGCGCT TTCCGGAGGC GCGCGTGCTC TTCACCGGGG GCAGCGGGCG GCTGTTCGGG GCCGAGATCC CCGAGGCCCG CATCGCACGC GAGATCCTCG TCTCGGCCGG TGTCGATCCG GCCCGGCTGA TCCTCGAGGG ACAATCGCGC AACACGGCCG AGAATGCGCG CTTCGCCAAG GCCCTCGTGG CGAACCAGGG GCAGGGAAGC TGGCTCCTCG TGACCTCGGC CTTCCACATG CCGCGCTCGG TCGAGACCTT CTGCGCGGCC GGCTGGCAGA ATCTGGTGCC CTGGCCCACC GACTACCGCA CGGCCAGCTT GCGCGACGGC ATCGGCTGGG ATCTGGCGCG CAATCTCGAT CTGCTGAACG TGGCCGTGCG GGAATGGATC GGGATCCTGG CCTACCGGGT CACGGGCCGG GCGGTGACCG CCCGTTGCAC GCGGGGCGGC TGA
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Protein sequence | MARNRFPPTQ APPMDTIFFI ASKLVWMLVR PETLLVLAVA AGLSALVLRR LRLAATLLLS SCLVFLAVGA LPLSYLALSS LERGWPADPP VGEVAGIILL GGSEDAAAAR KWRRPAVTEA GDRYLATIAL ARRFPEARVL FTGGSGRLFG AEIPEARIAR EILVSAGVDP ARLILEGQSR NTAENARFAK ALVANQGQGS WLLVTSAFHM PRSVETFCAA GWQNLVPWPT DYRTASLRDG IGWDLARNLD LLNVAVREWI GILAYRVTGR AVTARCTRGG
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