Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_3045 |
Symbol | |
ID | 4899159 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009050 |
Strand | - |
Start bp | 53688 |
End bp | 54578 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640113647 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001044917 |
Protein GI | 126463804 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.458337 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.369645 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTTC GCTTCATCGA AACCTTCCTC TGGGTGGCGC GTCTGGGCAG CTTCCGCGCC GCGGCCGAGC GGCTGAACAC AACGCAGGCC GCCGTCTCGA ACCGCATCGC CACGCTCGAG GCGGCGCTGG GGCAGGATCT CTTCGAGCGG ATGCCGGGCG GCGTGCGGCT CTCGCCCATC GGGCAGCGCG CCATCGCACC GGCCGAGGAT CTGATGCGCA GCGCCATGGA ATTCCGCATC TCGGTCGGCC GCCCCGAACA GCTCCGCTCG ACGGTGCGGA TCGGCACCAT CGACAGCATC GTCCAGGCCT GGCTCCCCCG CTTCATCGAG CGGGTGCGCG AGCTCTATCC CGGCCTCACG CTCGATCTGA ACGTCGATAC GTCGCGCGGG ATCGCGCGCG AGATCGTCGA GCGCAAGATC GACCTCGCGC TCCTGATGGG GCCGGTGCTC GAGGCGGGCC TGCGCAACGT GGATCTGGGC AGCATGGACT GCGCCTGGGT CGCGGCGCCG GGCTTCGGGC TGGGCGGGCG CAGGATCGGC CTCGCCGATC TCGTCGAGCT GCCGATCCTC ACCTTCTCGC GCAACAGCGA CCCGCATGTC TGGCTGATGC GCCAGTTCGA GGAGCTGCGC CTGCCGCAGC CCGCGATCTC GAACTCGAAC TCGCTCTCGG CCATGCTGCG GCTGGCGCTC GAAGGGGTGG GGGTGGCGCT GATGACACGG CCCGTCGTCG AGGCGGCGCT GGCCTCCGGG GCGCTCGACC TTCTCGACGT GGATCCGCCC TTTCCGCCGC TCGCGCTCCA TGCGGTCTTT GCCGACCACG GCGACAACCT GCTGCCCGTG GCCCTCTCGG AGGTCGCGGC GCAGGTCGCG CTGGAGGAGC GGGGGCGATA A
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Protein sequence | MNLRFIETFL WVARLGSFRA AAERLNTTQA AVSNRIATLE AALGQDLFER MPGGVRLSPI GQRAIAPAED LMRSAMEFRI SVGRPEQLRS TVRIGTIDSI VQAWLPRFIE RVRELYPGLT LDLNVDTSRG IAREIVERKI DLALLMGPVL EAGLRNVDLG SMDCAWVAAP GFGLGGRRIG LADLVELPIL TFSRNSDPHV WLMRQFEELR LPQPAISNSN SLSAMLRLAL EGVGVALMTR PVVEAALASG ALDLLDVDPP FPPLALHAVF ADHGDNLLPV ALSEVAAQVA LEERGR
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