Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_3021 |
Symbol | |
ID | 4898553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009050 |
Strand | - |
Start bp | 29630 |
End bp | 30886 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640113623 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_001044893 |
Protein GI | 126463780 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0354964 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACA GGAGCGACGA TCTCGCCCGC ATCCTCGACC GACGCCGCCG CGGGCGGCGC TGGCTCTGGC CGCTGCTGGC GCTGGTGCTG CTTGCGGGCG GGGGCCTTCT CTGGGCCTCG CGGCAGGGGG CGGAGCCCGC GCTTGCCTAT GTGACCGAGC CGGTGGAGCG GGGCGGGCTT GTCGTGACGG TGATGGCCAC GGGCACGGTG CAGCCCACGA CGCAGGTCGA GGTTTCCTCG GAACTGTCGG GCACGCTCGC CGCGGTGGAG GTGGATTACA ACGACGAGGT CGCGGTGGGC CAGCCGCTCG CCCGGCTGGA CGACACGCGG CTGAAGGCGC AGGTCGCCAA TGCCGAGGCC TCGCTCGAGG CGGCGGAGGG GCGGCTCGAA CAGGCCCGCG CCACCGCGCT CGAGGCGGCC GAGAACTACC GCTCGCGCTC GGCGCTCGAC CAGCGGGGCG TGGCCGCCCA TCTCGATCTC GTGGCGACCG AGGCCGCCCA CAAGCGCGCG GAATCCGAGG TGAAGATCGC CGAGGCCGAC CGCACGCTCG CGGCTGCCAA TCTCGAGGTG CAGCGGGTGG ATCTGGCGAA AGCCGTGATC CGCTCGCCGA TCCGCGGCAT CGTGCTCGAC CGGGCGGCGG AGGCGGGGCA GATCGTGGCC TCCTCGCTGA ACACGCCGGT GCTGTTCACG CTGGCCGAGG ATCTGACCCG GATGGAGCTG CGCGTCGACA TCGACGAGGC CGACATCGGC CGGGTGCGGG TGGGCAACCG CGCCTCCTTC AAGGTGGACG CCTATCCGGG GCGGAGCTTC AAGGCCGAGA TCGTGCAGGT GCGCTACGCG CCCGAGACGA CGGACGGGGT GGTGACCTAC AAGGCGGTGC TGTCGGTGGA CAATGGCGAG CGGCTGCTGC GGCCCGGCAT GACCGCGACC GCGACGATCA CGGTGGCCGA GGTCGAGGGG GCGCTCCTCG TGCCGAATGC CGCGCTGCGC TTCGCCCCGC CGGCGGTGGC CCAGCCCGGC AGTTCCGGCG GCAACCGCGG GGGCGGGCTG CTCGGGCTCA TCATGCCCCG GGCCCCCGGG CCGATGAGCG AGGCGGACGC CACGTCGGGC CCGACGGTCT GGGTCCTGCG CGACGGTGAG CCCGACCGCG TCGCGGTCGA GACCGGCGAG ACCGACGGGC GGCGGACCGA GATCCGCGGC GGCGCGCTCG AGGAGGGGGC TCCGGTCATC ACCGATCAGC GCGAGGCCGG AGCTTGA
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Protein sequence | MTDRSDDLAR ILDRRRRGRR WLWPLLALVL LAGGGLLWAS RQGAEPALAY VTEPVERGGL VVTVMATGTV QPTTQVEVSS ELSGTLAAVE VDYNDEVAVG QPLARLDDTR LKAQVANAEA SLEAAEGRLE QARATALEAA ENYRSRSALD QRGVAAHLDL VATEAAHKRA ESEVKIAEAD RTLAAANLEV QRVDLAKAVI RSPIRGIVLD RAAEAGQIVA SSLNTPVLFT LAEDLTRMEL RVDIDEADIG RVRVGNRASF KVDAYPGRSF KAEIVQVRYA PETTDGVVTY KAVLSVDNGE RLLRPGMTAT ATITVAEVEG ALLVPNAALR FAPPAVAQPG SSGGNRGGGL LGLIMPRAPG PMSEADATSG PTVWVLRDGE PDRVAVETGE TDGRRTEIRG GALEEGAPVI TDQREAGA
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