Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_2609 |
Symbol | |
ID | 4897229 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 2748947 |
End bp | 2749729 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640113209 |
Product | HAD family hydrolase |
Protein accession | YP_001044483 |
Protein GI | 126463369 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1877] Trehalose-6-phosphatase |
TIGRFAM ID | [TIGR00685] trehalose-phosphatase [TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACCAAC CTGCCCTGCA TCCCGACCAA GATGACGGCG CGGCGGTTCT GCGATCCGCG CTGCGCGATG CGCCCGACGA GTGGGCGCTC TTTCTCGACA TCGACGGGAC GCTGGTCGAC ATCGCCGAGC AGCCGCACGA CGTGCGCGTG GCCGCGGGTC TGCCGCAGGA TCTGGCGCGA CTGGCCGACC GGCTCGGGGG GGCTCTGGCT CTCGTGACCG GGCGGCGGGT CGACTGGATC GACGCCCACT TCGGGCCGCA TCTCTTCCCT GCCGCGGGTC TTCACGGGGT CGAGCGCCGC CGCGCCTCGG GAGAACTCGA CCGCGCGGGC CTCGCGCCGT CCCTGAACGC GCTGCGCAAG GATCTGGGGC GGCGCACGGC GCGGATGCCC GGCGTCCTCC TCGAGGACAA GGTGGCTGCG GTGGCGCTGC ATTACCGGCA GGCGCCCGAA CGCGAGCCCG ATGTGCGGGC GATGATGGAA ATGGCTTTGA AGGTGATGGG AGACGGTTGG GTGCTGCAGC ACGGCAAGAT GGTGGTGGAA CTGCGGCCGG CCTCGGCCAA CAAGGGCACG GCGCTCGAGG CCTTTCTGGC GGAGCCGCCC TTCGCCGGGC GGAGGCCCGT TGCGATAGGC GACGACGTGA CCGACGAGGA GATGTTCCGG GTGGTCAATA CCTGCGGCGG CCTCTCGGTG CGGATCTGCG AGACCGAGGC GCCGACGCTG GCCCGGGCGC GGCTCGCCTC GCCGCAGGCG CTCCGCGACC TCGTGGCGGA GCTCGGCGCA TGA
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Protein sequence | MHQPALHPDQ DDGAAVLRSA LRDAPDEWAL FLDIDGTLVD IAEQPHDVRV AAGLPQDLAR LADRLGGALA LVTGRRVDWI DAHFGPHLFP AAGLHGVERR RASGELDRAG LAPSLNALRK DLGRRTARMP GVLLEDKVAA VALHYRQAPE REPDVRAMME MALKVMGDGW VLQHGKMVVE LRPASANKGT ALEAFLAEPP FAGRRPVAIG DDVTDEEMFR VVNTCGGLSV RICETEAPTL ARARLASPQA LRDLVAELGA
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