| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_2462 |
|---|
| Symbol | |
|---|
| ID | 4897565 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | - |
|---|
| Start bp | 2594781 |
|---|
| End bp | 2595605 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640113060 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001044336 |
|---|
| Protein GI | 126463222 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.612548 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.124723 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCTCC TTCAGGTCGA GAACCTCCGC GTGACCTTCC CGACCCGGCA GGGCCCCTCC
GAGGTGGTCC GCGGCGTGAG CTTCACCCTC GGGCGCGAGC GGCTCGGGAT CGTGGGCGAG
AGCGGCTCTG GCAAGAGCCA GACCGGGCGC GCGATCCTGG GCCTGACACC GCCGCCCGGC
CGGGCCACCG CCGACCGGCT CGCCTTCGAC GGCATCGACC TCAACCGCGC CACGCCGCGC
CAGTGGCGGG CCCTGCGCGG CATCCGCATG TCGATGGTCA TGCAGGACCC GAAATTCTCG
CTGAACCCGG TGATGACCAT CGGCCGCCAG CTGACCGAGG CCGCGCGCCG CACCGCCTCG
CGCGGCGAGG CGAAGGACCG CGCGATGGCC ATGCTCGAGG CCGTGCAGAT CCGCGATCCG
TCCCGCGTCT TCGGCGCCTA TCCGCACGAG TTGTCGGGCG GCATGGGCCA GCGGGCCATG
ATCGCCATGA TGCTGATCGC CGAGCCGGAC CTCCTGATCG CGGACGAACC CACCTCGGCG
CTCGACGTCA CGGTGCAGAT CGAGGTCCTG CGCATCCTCG ACCGGCTGGT GCAGGACCGC
GGCATGGGGC TCGTCTTCAT CAGCCACGAC CTCCGTCTCG TCGGCAGTTT CTGTGACCGG
GTGCTGGTGA TGTATGCCGG CCGCGTGGTC GAGGAACTGC GCGCCGCTGA GCTGGCGCAG
GCCCGGCATC CCTACACGCA GGGGCTGCTG AACTGCCTGC CGCGGATCGA GGGGGGGCGC
CGGCCGCTGC CGGTGCTGGA ACGCGACGCG CGGTGGGCTC TCTGA
|
|---|
| Protein sequence | MTLLQVENLR VTFPTRQGPS EVVRGVSFTL GRERLGIVGE SGSGKSQTGR AILGLTPPPG
RATADRLAFD GIDLNRATPR QWRALRGIRM SMVMQDPKFS LNPVMTIGRQ LTEAARRTAS
RGEAKDRAMA MLEAVQIRDP SRVFGAYPHE LSGGMGQRAM IAMMLIAEPD LLIADEPTSA
LDVTVQIEVL RILDRLVQDR GMGLVFISHD LRLVGSFCDR VLVMYAGRVV EELRAAELAQ
ARHPYTQGLL NCLPRIEGGR RPLPVLERDA RWAL
|
|---|
| |