| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_2421 |
|---|
| Symbol | |
|---|
| ID | 4897154 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | - |
|---|
| Start bp | 2551091 |
|---|
| End bp | 2551489 |
|---|
| Gene Length | 399 bp |
|---|
| Protein Length | 132 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640113019 |
|---|
| Product | helix-turn-helix domain-containing protein |
|---|
| Protein accession | YP_001044295 |
|---|
| Protein GI | 126463181 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1813] Predicted transcription factor, homolog of eukaryotic MBF1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.195917 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.223738 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGATGG ACAATCAGGG CTGGTTCAGC AACGAGACGG CGACCTTCGG GGACCGTCTG
GCAGGCGCCC GCGAGGCCGC GGGCCTGACG CAGGAAGAGA TGGCGCGCCG GCTCGGCGTG
CGGCTCAAGA CCCTGCAATC GTGGGAGGAC GATCTGGCCG AGCCCCGCGC GAACCGGCTG
CAGATGATGG CGGGAATGCT CAATGTGAGC CTGCGCTGGC TTCTGACCGG CGAGGGCGAG
GGGGCGGAGG GTCCGTCCGA GCCCGCGATC CTGACCAGCG AGGGGCGCGA GGCGCTGGCC
GAGCTTGCGC GGATGCGCAC GCAGATGCTT GCGCTGGCTC AGGAGATGGG GCAGCTGGAA
AAGCGGATGC GGGCGCTCTT GCGCAAGGAG GCGGAATGA
|
|---|
| Protein sequence | MAMDNQGWFS NETATFGDRL AGAREAAGLT QEEMARRLGV RLKTLQSWED DLAEPRANRL
QMMAGMLNVS LRWLLTGEGE GAEGPSEPAI LTSEGREALA ELARMRTQML ALAQEMGQLE
KRMRALLRKE AE
|
|---|
| |