Gene Rsph17029_2340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_2340 
Symbol 
ID4896698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp2475262 
End bp2476263 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content72% 
IMG OID640112936 
Productmethyltransferase small 
Protein accessionYP_001044214 
Protein GI126463100 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2813] 16S RNA G1207 methylase RsmC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.271786 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTCTG CCCGTCTGAC ACTGGCGCTG GAAACCGGCG CGGTCGTCCT GCCCGATGCG 
GGCAGTATCG TCGTCTATCG TCCGCGCGCG GCCGAGGATC TTTCGGCGCT GCCCAGGGAC
CGGCTGGTGC TGGTGCAGGG CTTCCGCCCC GATCACGACG CTCTCGCGGC GCAGGGGTAT
AAAGTGGGCA TCGCCGGCGG TGCGGGCCAT GCCGCTGCCA TCGTCTGCCT GCCGCGCGCC
CGGGCCGAGG CCCGCGCGCT TCTGGCCGAG GCGGCGGCCT CGGTCGAGCC GGGCGGGCTG
ATCGTGGTGG ACGGGCAGAA GACCGACGGT GTCGAGCCGA TGTGGCGCGA TCTGTCCGAA
CGGCTGGCGG TCTCGGCCAC CCTCTCCAAG GCCCACGGCA AGCTCTTCAC TTTCGCGGCC
GGTCCGGGGC TCGAGGACTG GGCCGCGCGG CCCACCGAAA TCGCGGGCGG CTTCCGCACG
CTGCCCGGCA TCTTCTCGGC CGATGCGCCC GACCGCGGTT CGCAGCTTCT GGTCGAGGCG
CTGCCCACGG ATCTCTCGGG CCGGGTCGTC GATCTCGGCG CGGGCTGGGG CTATCTGGCG
CGCGCGGTGC TCGAGCGGCG GCCGGTGAAG CGGATCGATC TCGTCGAGGC CGAACATGCG
GCGCTCGACT GCGCACGGTT CAACATCCCG GACAAGCGCG CCCATTTCCA CTGGGCCGAC
GCCACCCGCT TCCGTCTCTC GAAGCCCGCC GATCTGGTGG TCTGCAACCC GCCCTTCCAC
ACGTCGCGCG AGGCCGATCC CGCCATCGGG ATGGGCTTCC TGCAGGCGGC TGCGCGGCTT
CTCGCCCCCA CGGGGGTGCT CTGGCTGGTG GCCAACCGCC ATCTGCCCTA TGACCGCGGC
CTCCGCACGC TCTTCCGCGA GGTCGAGGAC ATCGGCGGCG ATGCCGCCTT CAGGATCGTC
CGCGCGTCCC GACCCCAGCG CGCGGGCGGC ACATCTGCAT AA
 
Protein sequence
MRSARLTLAL ETGAVVLPDA GSIVVYRPRA AEDLSALPRD RLVLVQGFRP DHDALAAQGY 
KVGIAGGAGH AAAIVCLPRA RAEARALLAE AAASVEPGGL IVVDGQKTDG VEPMWRDLSE
RLAVSATLSK AHGKLFTFAA GPGLEDWAAR PTEIAGGFRT LPGIFSADAP DRGSQLLVEA
LPTDLSGRVV DLGAGWGYLA RAVLERRPVK RIDLVEAEHA ALDCARFNIP DKRAHFHWAD
ATRFRLSKPA DLVVCNPPFH TSREADPAIG MGFLQAAARL LAPTGVLWLV ANRHLPYDRG
LRTLFREVED IGGDAAFRIV RASRPQRAGG TSA