| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_2287 |
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| Symbol | |
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| ID | 4897782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | - |
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| Start bp | 2418057 |
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| End bp | 2419364 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640112883 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_001044161 |
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| Protein GI | 126463047 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.52701 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.181446 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAACG TCGCCATCGG CTTCACCGGG ATCGGCATCG GCCTGATCCT CCTCGCCCTC
CGGGTCCAGA TCGGCGTGGC GCTGGGTCTC GTCTCCTTCG TGGGCATCGG CATCCTGCTC
AGCTGGCGGG CCGCCTGGGG CATCGTCACC GCGATCCCGT TCAACTTCGT GGGCGACTGG
AATCTGACCG CGATCCCCAT GTTCCTCCTG ATGGGATTCG TGGCCTCCGA GGCCGGGCTC
TCGAGCGGGC TGTTCCGCGC CATGCGCATC CTTCTGTCCT GGCTGCCGGG CGGGCTTGCG
GTCTCGAGCG TTGGAGCGAA TGCGGTTCTG GCCGCCGCCT CGGGCTCGTC CGTCGCGACC
GCCTCGGCCT TCGCCCGGAT CGCCACGCCC GAGATGCTGC GCTACGGCTA TCACCCGGGC
CTCGCCACGG GCGTGATCGC GGCCGCGGGA ACCCTCGGCG CGCTGATCCC GCCCTCGATC
CTCATGGTGC TCTACGGCTA TCTGGCCGAG GTCTCGATCG CCCAGCTCTT CGCGGCGGGG
ATCGTCCCGG GCATCCTCAC CGCTCTCGCC TTCTCGATCA TGATCGTGGT GCGCTGCCTC
CTGAACCCGC GCCTCGCGCC GAAGATCGAG GACCGCTTCA CCCGCGCCGA GAAGCTCGCA
GCATTTCAGG AGACCTGGCC GCTGCCGGTC ATCATCCTCG GCGTGCTCTG CGGGATCTTC
GTGGGCTTCT TCACCCCGAC CGCGGCCGGA GCCGTCGGTG CGGCACTGGC GATCCTGCTG
GGCCTTCTCC GCGGAAAGAT CGATTTCGAC GTCATGAAGC GGGCCACCGA GGCCACGCTG
ATGTCGACCG CCTCGATCTT CCTCGTCATC ATCGGAACCT CGCTGCTGGG CAAGTTCATG
GCGATCTCCG GGGTGCCCGC CTATGCGGCC TCGCTTCTGG TCGAGTTCGG CACCACCCAG
CTCATGGTGC TCCTTGCGGT GAGCCTTCTC TACATCTTCC TCGGCATGTT CCTCGATTCC
ATGGGGATCC TGCTTCTGAC CATGCCGATC ATCCTGCCCA TGGCGCGCGA GGCGGGGCTC
GATCTGATCT TCTTCGGCAT CATCCTCGTG AAGCTGCTCG AGATCGGCCT GCTGACCCCG
CCGGTCGGGC TCAACGTCTA TATCATCAAG GGCGCGCTCG GAGACCGGGT GTCGCTCACG
ACGATCTTCA AGGGTGTGGG CTGGTTCATC GCGGTCGATC TGGTGCTGCT CGCGATCCTC
GTCGAATGGC CCGTGCTCGT GACCGGCCTG CCGAGCCTGA TGTTCTAG
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| Protein sequence | MSNVAIGFTG IGIGLILLAL RVQIGVALGL VSFVGIGILL SWRAAWGIVT AIPFNFVGDW
NLTAIPMFLL MGFVASEAGL SSGLFRAMRI LLSWLPGGLA VSSVGANAVL AAASGSSVAT
ASAFARIATP EMLRYGYHPG LATGVIAAAG TLGALIPPSI LMVLYGYLAE VSIAQLFAAG
IVPGILTALA FSIMIVVRCL LNPRLAPKIE DRFTRAEKLA AFQETWPLPV IILGVLCGIF
VGFFTPTAAG AVGAALAILL GLLRGKIDFD VMKRATEATL MSTASIFLVI IGTSLLGKFM
AISGVPAYAA SLLVEFGTTQ LMVLLAVSLL YIFLGMFLDS MGILLLTMPI ILPMAREAGL
DLIFFGIILV KLLEIGLLTP PVGLNVYIIK GALGDRVSLT TIFKGVGWFI AVDLVLLAIL
VEWPVLVTGL PSLMF
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