| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_2257 |
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| Symbol | |
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| ID | 4897407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | - |
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| Start bp | 2389681 |
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| End bp | 2390772 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640112852 |
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| Product | phage integrase family protein |
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| Protein accession | YP_001044132 |
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| Protein GI | 126463018 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0034941 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.642714 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCGTC CGTCCAAAGG TGCCCGTCTC TATCTCGTCA CCCGGACCGG CCGTTCCCCG
GTCTGGGTGA TCCGAGATGG CGCCTGCGAG ATCTCGACCC GCACTGGCCA CCGCGGCGAA
GCTGAAACGG CTCTCGCGGC TTACATTGCC GACCGAGACC AGCGAGCGAG ACCGAGAAGC
TGCCTCGCCG CGGACGAGAT GACGGTGGCC CATGCGCTCA CCCTCTATGG GGAGGAGCAC
GGTCCCACCG TCGCGGATCC CCAGCGGATC GGCTACGCCA TCGAGGCGCT GATGACTTTC
TGGGGTAACC TCCGGGTGGC GGCGATCCGG GGAGAGACGT GCCGCACCTA CGCCCGCCAC
CGGGGCAGGG CGCCGGGCAC CATCCGGCGC GAGCTGGGCA CGCTGCAGGC GGCGCTGAAT
CACTGCGTCC GCGAGGGCCA TCTTCTCAGC GCGCCGAAGG TGACGCTGCC GGAGAAGCCC
AGGGCCCGGG AGCGCTGGCT GACGCAGGAG GAGGCCTACT GGCTCCTGCG GGCGGCCCGG
AGCCTGCGTC GGGACGGTCG TCACCTCGCA TGGTTCATCG TGGCCGGCCT CTATACGGGC
ACCCGGAAGA CGGCCCTGCT CGGCCTGCGC ATCAACCAGC CCGGCACGGA TGCGGGCTGG
GTGGATACCG AGCGCGGGGT CCTCTACCGG GCGGGCAGCG GGAAGCGCGA GACGAACAAG
CGCCAGCCTT CGGTGAGGCT TCCGCGGCAA CTCCGCGCGC TCCTCGCGGC CGGAGCCCGC
AGCGGCCGGC GGTTTGTCGT CCAGACCAGC GAAGGCAGCC GGGTCGCCGA CATCAAGAAG
GCCTGGGCGG GAGCCGTGGT GAAAGCCGCC GAGATGGCGG CGAGGGCAGG GCGCGAGATC
GATCTGTCCG ACACGACGCC GCATGTCCTT CGCCACACGG CGATCACCTG GGCGATGCAG
CGGGGTGCCG ACATGTGGGA GGCGGGCGGA TTCTTCGGCG TGTCGCGGGA GACGATGGAG
GAGGTTTATG CCCACCACCA TCCGGACCAT CAGGCGAGCG CCGTCGAGGC GATGGAAAGG
CGGCGGAAAT GA
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| Protein sequence | MSRPSKGARL YLVTRTGRSP VWVIRDGACE ISTRTGHRGE AETALAAYIA DRDQRARPRS
CLAADEMTVA HALTLYGEEH GPTVADPQRI GYAIEALMTF WGNLRVAAIR GETCRTYARH
RGRAPGTIRR ELGTLQAALN HCVREGHLLS APKVTLPEKP RARERWLTQE EAYWLLRAAR
SLRRDGRHLA WFIVAGLYTG TRKTALLGLR INQPGTDAGW VDTERGVLYR AGSGKRETNK
RQPSVRLPRQ LRALLAAGAR SGRRFVVQTS EGSRVADIKK AWAGAVVKAA EMAARAGREI
DLSDTTPHVL RHTAITWAMQ RGADMWEAGG FFGVSRETME EVYAHHHPDH QASAVEAMER
RRK
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