Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_2158 |
Symbol | |
ID | 4896225 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | + |
Start bp | 2285966 |
End bp | 2287441 |
Gene Length | 1476 bp |
Protein Length | 491 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640112752 |
Product | two component, sigma54 specific, Fis family transcriptional regulator |
Protein accession | YP_001044033 |
Protein GI | 126462919 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00791251 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.142838 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCGGC CGCTGGTCCT CCTCGTCGAC GACGAGCCGC ATGCTCTGGC CGCGATGCGG ATGGCGCTCG AGGACGAGTT CGACATCGCC ACCGCCGCCT CGGGCGAGGA GGCGCTGCGG ATCCTCGAGG ATCAGTGGGT GCAGGTCATC ATCTCCGACC AGAGGATGCC CGGCATGACG GGCGTCCAGT TCCTCACGCA GGCGCGCGAG CGCTGGCCCG AGACGGTGAG GATCATCCTC ACCGGCTACA CCGACGCCTC CGCGATGGTC GCCGCGATCA ACGAGGCGGG CATCCACCAG TTTCTGACCA AGCCCTGGAT CCCCGACCAG CTGGCGATGG CTGCGCGCAA CGCCACCCGC CTCTTCCATC TCGCGCGCGA GAACGAGCGG CTGGCGCTGG AAATGCGCTT TCTCAATTCG ACCGTCGAGA CGCGGCTCGA GAAGCGGCGG CGGGCGCTGC GCGAGGGCAT GGGGTTCGAG AGCATCCTGC GCGCGCCCTC TTCGCCCATG AATGCGGTGG TGCAGGCCGC GCGCCAGTTC GCGAGCTTCG ACCTGCCGGT GCTGCTGACG GGCGAGCCCG GCACGGGCAA GGCGCAGCTC GCGCGCGCGA TGCATTACGG CTCGCTCCGC TCCGACCGGC CGTTTCACGA GTTCAACCTG CAGGGCGTGC CCGAGGAGCT GGCCGCGATC GAGCTCTTCG GCGCGAAGCG CGGGGTGGCT GCGGGCAATG CGAGCCGCGT GGGCCTCGTG CAGAAGGCCG ACCGCGGGAC GCTTCATCTG GGCGCCATCG ACACGGCCTC GCCCGCGCTT CAGATGGCGC TGATGCGGAT GCTGGGCACC GGCAGCTTCA GCCCGGTGGG CGGGCAGGAG ACGCTGACCA CGAACCTCCG GCTCATCGCC TCGTCGCACC GCGACCTCCG CAGGCTGGTG GCCGAGGGGC ATTTCCGGGC CGACCTCTAT TATGCGCTCT CGGCGGGCGA GATCGCGGTG CCGCCGCTGC GCGCCCGGCG CGGGGATGTG GCCCTGCTGG CGCAGGTGAT GCTCGCCGAT CTCGCAGCGA CCCACGGCAA GCCCATCCAC GAGATCGAGC CCGCCGCCCT CGAATTCCTC GAGAATTACG ACTGGCCGGG CAATCTGCGC GAGCTTTCGA ACGAAATCAC GCGGATGCTG GTCTTCACGC AGGGCAAGGT GCTGACCGCC GATCTGATCT CGCGCCCGAT CCTGCAGGCC ACTCCCTCGG AGAGCGGCGC GGACCGCTCG GCCGAAGCGG TGCTGACAGC AGACGGCACG CTCAAGGACC GGGTCGAGCT GATCGAGATG CGCATCCTGC GCGAGACGCT GACCCGGCAC CGCTGGAACA AGAGCCGCGC CGCGGCCGAG CTGGGGCTGA GCCGCGTGGG GCTGCGCGCC AAGCTCGACC GCTACGGGAT CGCCGATCCC GCCGGGCGGC TGGCCGCCGA AGAGGAGGAA GACTGA
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Protein sequence | MSRPLVLLVD DEPHALAAMR MALEDEFDIA TAASGEEALR ILEDQWVQVI ISDQRMPGMT GVQFLTQARE RWPETVRIIL TGYTDASAMV AAINEAGIHQ FLTKPWIPDQ LAMAARNATR LFHLARENER LALEMRFLNS TVETRLEKRR RALREGMGFE SILRAPSSPM NAVVQAARQF ASFDLPVLLT GEPGTGKAQL ARAMHYGSLR SDRPFHEFNL QGVPEELAAI ELFGAKRGVA AGNASRVGLV QKADRGTLHL GAIDTASPAL QMALMRMLGT GSFSPVGGQE TLTTNLRLIA SSHRDLRRLV AEGHFRADLY YALSAGEIAV PPLRARRGDV ALLAQVMLAD LAATHGKPIH EIEPAALEFL ENYDWPGNLR ELSNEITRML VFTQGKVLTA DLISRPILQA TPSESGADRS AEAVLTADGT LKDRVELIEM RILRETLTRH RWNKSRAAAE LGLSRVGLRA KLDRYGIADP AGRLAAEEEE D
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