Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_2149 |
Symbol | |
ID | 4896462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | + |
Start bp | 2279973 |
End bp | 2280758 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640112743 |
Product | Ni/Fe-hydrogenase, b-type cytochrome subunit |
Protein accession | YP_001044024 |
Protein GI | 126462910 |
COG category | [C] Energy production and conversion |
COG ID | [COG1969] Ni,Fe-hydrogenase I cytochrome b subunit |
TIGRFAM ID | [TIGR02125] Ni/Fe-hydrogenase, b-type cytochrome subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0320701 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.217874 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACACCG AGATCGTCAC GATCCACGTC CCGAACCCGA ACGCCCCCAC CCCGCTCGAA GCCTCGCGCA AGACCGGGAC GGCGCGGCCC GAGGATATCG AGAGCATCTT CTACAAGACC TCGGTCTATG TCTACGAAGT GCCGGTGCGG CTCTGGCACT GGCTGAATGC CGCGATGATC TTCATCCTGA TCGGCTCGGG CTATCTGATC GCCCGGCCGC TTCCGACCCT GGAGATGGCC GAGGCGACCG ACCAGTTCGT GTTCGGCTAC ATCCGCTTCG CCCATTTCGC GGCCGGACAG GTGCTGACCG TGGCCTTCGC GGCGCGGATC CTCTGGGCCT TCTTCGGCAA CGTCCATTCG CGGCAGATGT TCAAGCTGCC GGTCTGGAAC CTGCGCTGGA TCCGCGAGCT GATCTACGAG CTGAAATGGT ATCTCTTCCT CGTGCCCGAG CCGCGGAAAT ACGTCGGCCA CAACCCTCTG GCCCATGCCG CGATGTTCTT CTTCATCACG CTCGGCATGA GTTTCATGAT CGTCACGGGC TTCGCGCTCT ATGCCGAGGG CGCCGGTCAG GGCTCGGTCT ACGACACTCT CTTCGGCTGG GTGCTGGGGC TGGTCGGCAA CAGCCAGCGG CTGCACACGC TGCACCATCT GGGCATGTGG TCGATCGTGG TCTTCACCAT CATCCACATC TATGCCGCCG TCCGCGAGGA CATCATGTCC CGGCAGTCGA TGATCTCGAC CATCGTCTCA GGCTGGCGGA CCTTCAAGGA CGACCGGGTG GAATAG
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Protein sequence | MDTEIVTIHV PNPNAPTPLE ASRKTGTARP EDIESIFYKT SVYVYEVPVR LWHWLNAAMI FILIGSGYLI ARPLPTLEMA EATDQFVFGY IRFAHFAAGQ VLTVAFAARI LWAFFGNVHS RQMFKLPVWN LRWIRELIYE LKWYLFLVPE PRKYVGHNPL AHAAMFFFIT LGMSFMIVTG FALYAEGAGQ GSVYDTLFGW VLGLVGNSQR LHTLHHLGMW SIVVFTIIHI YAAVREDIMS RQSMISTIVS GWRTFKDDRV E
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