Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_2138 |
Symbol | |
ID | 4895223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 2265513 |
End bp | 2266490 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640112732 |
Product | TRAP dicarboxylate transporter, DctP subunit |
Protein accession | YP_001044013 |
Protein GI | 126462899 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.231468 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.866818 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAA CAATGATCGC GACCCTGCTG GCGAGCGCCG CGCTCGCGGC ACCCGCCTTC GCCGAGTGCG AGGTGACGCT GCGGTCTTCG GACACGCACC CGGATGGCTA TCCGACCGTC GAGGGCGTCA AGTTCATGGC CGAGCGCGCC AAGGAACTGT CGAACGGGCG CATCTGCATC GAGGTCTTCC CCTCGTCGCA GCTCGGCGAA GAGAAGGACA CGATCGAGCA GACCCAGTTC GGCGTGATCG ACATGGTGCG CGCCTCGTTC GGCTCGTTCA ACGACATCGT GCCCGAGGCG CAGCTCCTGT CGCTGCCCTA CCTCTTCCGC TCGGAAGAGC ATCTGCACAA TGTGATGGAC GGCCCGATCG GCGACGAGCT CGCCAAGGCC TTCGAGGCCA AGGACCTGAT CGCGGTGGCC TACTATGACG GTGGCTCGCG CAGCTTCTAC AACAGCCAGA AGCCGATCAC CAAGGTCGAG GACCTCAAGG GCATGAAGTT CCGCGTCATG CAATCGGACG TGTTCGTGGA CATGATGTCC GCGCTCGGCG CCAATGCGAC GCCGATGCCC TACGGCGAGG TCTATTCCTC GATCCAGACC GGCGTCATCG ACGGGGCCGA GAACAACTGG CCGTCCTACG ACAGCTCGGG CCATTTCGAG GTGGCGAAAT ACTACACGCT CGACCAGCAT CTGATGGTGC CCGAGCTGGT GGCGATCTCG AAGATCAAGT GGGACGCGCT CTCGCCCGAG GACCAGCAGG TGCTGCGTCA GGCGGCCGAA GAGTCCGAGC CCGTGCAGCG CAAGCTCTGG GCCGAGCAGG AGAAGGCCTC GGAAGAGAAG GTCGTGGCCT CCGGCGCTGA GGTCGTGCGC GAGATCGACA AGACCCCCTT CATCGAGGCG ATGGCTCCGG TCTACGAGAA ATACGTGACC AAGTCGGAAT ATCAGGATCT CGTGAAGCGG ATCCAGGAAA CCCAGTGA
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Protein sequence | MKKTMIATLL ASAALAAPAF AECEVTLRSS DTHPDGYPTV EGVKFMAERA KELSNGRICI EVFPSSQLGE EKDTIEQTQF GVIDMVRASF GSFNDIVPEA QLLSLPYLFR SEEHLHNVMD GPIGDELAKA FEAKDLIAVA YYDGGSRSFY NSQKPITKVE DLKGMKFRVM QSDVFVDMMS ALGANATPMP YGEVYSSIQT GVIDGAENNW PSYDSSGHFE VAKYYTLDQH LMVPELVAIS KIKWDALSPE DQQVLRQAAE ESEPVQRKLW AEQEKASEEK VVASGAEVVR EIDKTPFIEA MAPVYEKYVT KSEYQDLVKR IQETQ
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