Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_2121 |
Symbol | |
ID | 4895762 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 2248839 |
End bp | 2250029 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640112715 |
Product | hydroxyglutarate oxidase |
Protein accession | YP_001043996 |
Protein GI | 126462882 |
COG category | [R] General function prediction only |
COG ID | [COG0579] Predicted dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.110879 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.696604 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACCAGCA GCGATTTTGT CATCACCGGC GGCGGCATCG TGGGCCTCGC CACCGCCCTC CGCCTCCAGT CCCTCCATCC CGGCGCGCGG ATCTCGGTGC TCGAGAAGGA GCCCGCCGTG GCCCGCCACC AGTCGGGCCG CAACTCGGGC GTGATCCATG CCGGCGTCTA TTACGCGCCC GGCAGCCACA AGGCCCGCTT CTGCGCCCGC GGCGTCTCCT CGACCCGCGC GTTCTGCGAC GAGCACGGCA TTCCTTACCG CATCTGCGGC AAGCTGATCG TGGCCACCGA CGCGGCCGAA CTCGAGCGGA TGGGCACGCT CGAGACGCGC GCGCGGGCCA ACGGCATCGT CATCGAGCGG CTCTCGGGCG AGGAGGCGCG GCGGCTCGAA CCCAACATCA AGGCGGTCGG CGCGCTTCTG TCGCCCACGA CCGGCATCGT CGATTACGGC CGGGTGGCCG AGCGCATGGC CGAGCTCTTC CGCGACCGGG GCGGCGAGAT CCGGCTCGAC ACCGAAGTGA CGGGCGGGGC CGAGAGCGAG GCGGGCGTGC GGCTCGAGAC GACGGCGGGC GAGATCTCGG CAGGCAAGGC GGTGTTCTGC GGCGGCCTTC ACGCCGACCG GCTGGCGCGG GCCTTCGGGG CGAGCCTCGA TTTCCGCATC GTGCCCTTCC GCGGCGAATA TTTCGCGATC AAGAACCAGC CCGAGGATCT GGTGCAGCAT CTGATCTACC CGGTGCCCGA TCCGGCGCGG CCCTTCCTCG GCGTCCATCT CACGCGCAAG ATGAACGGGG GCTTCACCGT CGGGCCGAAT GCCGTGCTCG CCATGGCGCG CGAGGGCTAC ACGAACGGCA TCATCTCGGT GAAGGATCTG GCCGACAGCC TGAGCTACAG GGGCTTCTGG AAGCTCATGC GGCGCAATGC GGGCGCTGCG GCCGAGGAAC TGTCCGCCTC GCTCGTCCGC CAGCTCTACC TGCGCAAGGT GCACAAGTAC TGCGACCGGA TCCGGCTGCA GGACCTCGCG CCCTACCGCG CGGGCGTGCG GGCGCAGGCG GTGGGGGCGG ACGGGCGCAT GATCGACGAT TTCGTCTTCG TGCGCACGCG CCACGCCCTC CATGTCTGCA ACGCGCCCTC GCCGGCCGCG ACCTCGGCCC TGCCCATCGC CGAGCATATC GTGGACGAAC TGCTCGCCTG A
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Protein sequence | MTSSDFVITG GGIVGLATAL RLQSLHPGAR ISVLEKEPAV ARHQSGRNSG VIHAGVYYAP GSHKARFCAR GVSSTRAFCD EHGIPYRICG KLIVATDAAE LERMGTLETR ARANGIVIER LSGEEARRLE PNIKAVGALL SPTTGIVDYG RVAERMAELF RDRGGEIRLD TEVTGGAESE AGVRLETTAG EISAGKAVFC GGLHADRLAR AFGASLDFRI VPFRGEYFAI KNQPEDLVQH LIYPVPDPAR PFLGVHLTRK MNGGFTVGPN AVLAMAREGY TNGIISVKDL ADSLSYRGFW KLMRRNAGAA AEELSASLVR QLYLRKVHKY CDRIRLQDLA PYRAGVRAQA VGADGRMIDD FVFVRTRHAL HVCNAPSPAA TSALPIAEHI VDELLA
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