Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_2050 |
Symbol | dnaG |
ID | 4896458 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 2172302 |
End bp | 2174233 |
Gene Length | 1932 bp |
Protein Length | 643 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640112643 |
Product | DNA primase |
Protein accession | YP_001043925 |
Protein GI | 126462811 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0358] DNA primase (bacterial type) |
TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.279269 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCCTGC CACCCGGATT CCTCGACGAA CTGCGCAATC GCGTCCCGCT CTCGCAGGTG GTCGGGCGCA AGGTGACGTG GGATCTGCGC AAGTCGAACC AGGGCAAGGG CGACTTCTGG GCGCCGTGTC CCTTCCATCA GGAGAAGTCG GCGAGCTTTC ACGTCGACGA TCGCAAGGGC TTCTATTACT GCTTCGGCTG CCATGCGAAG GGCGATGCCA TCGCCTTCGT GAAGGACACC GAGAATGTGG GCTTCATGGA GGCGGTCGAG ATCCTTACGC GCGAGGCGGG GATGGCGATG CCGGCCCGCG ATCCGCGCGC GGCCGAGAAG GCCGACCGGC GGAGCCAGCT TGCCGAGGTG ATGGAGGAGG CGGTGAGGTT CTACCGCCTG CAGTTGCGCA CCGGGGCGGC ATCGGCCGCG CGCGACTATC TTGCGCGGCG CAGGCTGTCG GAGGAGGGGC AGGAGCGGTT CGGCATCGGC TTCGCGCCGG ACGCGCGGCA GGCGCTGTTT CAGGCGCTGA CCGGCAAGGG GATCGCGCCG GATCTGCTGG TCGAGGCCGG GCTCTGCGCG CGCCCCGAGG ATGGCGGCGC GCCCTATGAC CGGTTCCGCG GCCGCATCAT CTTTCCGATC CGCGACGCGC GGGGGCGGGC GATCAGCCTC GGCGGCCGGG CGATGGATCC GGCGGCGCGG GCGAAATATC TCAACGGGCC CGAGACGCCG CTCTTCGACA AGGGGCGCAA CCTCTACAAT GCAGGGCCGG CGCGCGAGGC GGCGGGCAAG GGCCAGCCGC TCGTGGTGGC CGAAGGCTAC ATGGATGTGA TCGCCCTGTC GGAGGCGGGG TTCCGGGCCA CGGTGGCCCC CCTCGGCACC GCCATCACCG AGGACCAGCT GCGGCTCATG TGGCGCATAC ATCCCGAGCC GGTGATCGCG CTCGACGGGG ATGCGGCGGG CATCCGGGCG GCGCTGCGGG TGGTGGATCT GGCGCTGCCG CTTCTCGAGG CGGGGCAGGG GCTGCGCTTT GCGGTGCTGC CGCCGGGGCT CGATCCCGAC GATCTGATCC GCGCCGAGGG GGCTTCCGCC ATGGGGCGCG TGCTCGAGGC CGCGCAGCCG ATGGTGGGGC TTCTGTGGCG GCGCGAGACC GAAGGCCATG TCTTCGACAG CCCCGAGCGG CGTGCGGCGC TGGACAAGCG GCTGCGCGCG GCGGTGCAGC GGATCGCCGA TCCGAGCATC CGGCGCCACT ACGGGGACGA GCTGAACCGG CTCCGGATGG AGATCTTCGG CACCTCCGTG CCGCGGCGCG CCTTCCACCG CGGCGGCAAA CGCGAGCCTC TGGCGGTGGC GCCCCATCCT TCGACGCGCG CCTCGCTTCT GGCGACGGCG GCGGGCGAGC GGATCGAGGA GGAGATGCGG CTCGGCGTGA TTCTCGCCAC CTGCGCGCTG CATCCGACGC TGATCCACGA GTTCGAGACG GCGCTCGAGG CGCTGGAGCT GTCCGATCCC GATGATCGGG CGCTCCACCG GGTGCTTCTC GCCGCCGCCG GGATGGCCGA GGCCGACACG GCGCGGGGTG TGATCCGTGC CGAGGCGGGC CCGGCCCTTG AAAGGCTGCT GGCGCTGACC CATGTTCGCA TCTGCCCGTC GGTGCGCCAC CCCGGGGATC TCGAGATGGC GCGCATGTGC CTGGCCGAGG AGCTCGCGAA GCTCGAGGCC CGGCGCGGCG CACGGCAGGA AATCGAGGAG GCGGTCGAGG ATCTGGCGGG TCTCGTGGAC GAGGGGCTGA CGTGGCGCCT GTCGCAGGCG GCGGAGGCGC GGCATCGTGC CGAACGGGCC CGTCTTGACG ACTCGTCCGA CCTTGGCGAA GACCGGGCCG CCCTGTCGAG ATCGCTGCAG GAGATGATCG ATCGCCAGAT CTGGGTAAAG AAAAGGGGCT GA
|
Protein sequence | MSLPPGFLDE LRNRVPLSQV VGRKVTWDLR KSNQGKGDFW APCPFHQEKS ASFHVDDRKG FYYCFGCHAK GDAIAFVKDT ENVGFMEAVE ILTREAGMAM PARDPRAAEK ADRRSQLAEV MEEAVRFYRL QLRTGAASAA RDYLARRRLS EEGQERFGIG FAPDARQALF QALTGKGIAP DLLVEAGLCA RPEDGGAPYD RFRGRIIFPI RDARGRAISL GGRAMDPAAR AKYLNGPETP LFDKGRNLYN AGPAREAAGK GQPLVVAEGY MDVIALSEAG FRATVAPLGT AITEDQLRLM WRIHPEPVIA LDGDAAGIRA ALRVVDLALP LLEAGQGLRF AVLPPGLDPD DLIRAEGASA MGRVLEAAQP MVGLLWRRET EGHVFDSPER RAALDKRLRA AVQRIADPSI RRHYGDELNR LRMEIFGTSV PRRAFHRGGK REPLAVAPHP STRASLLATA AGERIEEEMR LGVILATCAL HPTLIHEFET ALEALELSDP DDRALHRVLL AAAGMAEADT ARGVIRAEAG PALERLLALT HVRICPSVRH PGDLEMARMC LAEELAKLEA RRGARQEIEE AVEDLAGLVD EGLTWRLSQA AEARHRAERA RLDDSSDLGE DRAALSRSLQ EMIDRQIWVK KRG
|
| |