Gene Rsph17029_1984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1984 
Symbol 
ID4895582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp2102575 
End bp2103597 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content68% 
IMG OID640112578 
Producthypothetical protein 
Protein accessionYP_001043860 
Protein GI126462746 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.372704 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.185401 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGGC GCACGGTTTC CCTTACAGTG CTGGCCCTCG TGCTCGCGCT TCTGATCCTC 
GTGGCGCCGG ATGTGCTGCT CGTGATCTTT GCGGGCGTCC TGTTCGGCGT GTTCCTCTCG
GCGGGCGGAG GCCTCGTGCA GCGGGTGACC GGGCTGCAGA GGGGGGCGGG GATTGCCCTC
TTCATCGTCC TCGTCCTTCT CGCCCTGACG GGCGCCTTCC TCGCCTTCGC CCCGGCGATG
TTCGAGCAGG CCGATGCGCT CGCCCGCCAG CTTCCGCCCG CATTCGAGGA TCTGCGCGAC
CGGATCTCCG CCTACAGCTG GGGGCCCACG CTTCTGTCGC GGCTTGCGCC GTCGCGGCTG
CTGTCCAGCG ACGGAGGCTT CGCCTCGACC GCGGTCAGCG CCACCTTCGG CGCGCTGGGA
AATGTCGTCA TCATCCTCTT CATCGGCCTC TATACGGCGG TGGATCCCGG TCTTTACGCA
CGAGGCCTGC GGGCGCTCCT CGCGCCGCCG CTGCGCCCGA GGGGAGACGA GGTGCTGGCC
ATTGCCGATG GCACGCTGCG CGGCTGGCTC GGCGGGCAGA TCATCTCGAT GACCGTGGTG
GGCGTGCTGA CCTGGCTCGG GCTCTGGCTG ATCGGGATTC CGCTGGCCTT CATCCTCGGA
TTGATCGCGG CGCTCCTGAC CTTCATCCCG AACATCGGCC CCGTGCTCTC GGCGGTGCCG
GCGCTGCTCC TCGCCCTGCC CGAGGGCGCA GAGCAGGTCG GGCTGGTGCT GGCGGTCTTC
CTGACCGTCC AGACCTTCGA GAGCTATCTG GTCACGCCCC TCATCCAAAA GGAGAGGGTC
GCCCTGCCTC CCGCGCTCAT CATCTCGGCG CAGTTGCTGA TGGGGGTGCT GTTCGGGCTG
ATGGGTCTGC TGCTCGCCAC ACCTCTGGCG GCACTGGCGC TCGCGCTGGT GCGGGAGGTC
TATGTGCATG ATTACCTTGA GGAAGGGCCG GCGAAGGCCC AAGGTCCTGA CCGGGCGGAT
TAA
 
Protein sequence
MSRRTVSLTV LALVLALLIL VAPDVLLVIF AGVLFGVFLS AGGGLVQRVT GLQRGAGIAL 
FIVLVLLALT GAFLAFAPAM FEQADALARQ LPPAFEDLRD RISAYSWGPT LLSRLAPSRL
LSSDGGFAST AVSATFGALG NVVIILFIGL YTAVDPGLYA RGLRALLAPP LRPRGDEVLA
IADGTLRGWL GGQIISMTVV GVLTWLGLWL IGIPLAFILG LIAALLTFIP NIGPVLSAVP
ALLLALPEGA EQVGLVLAVF LTVQTFESYL VTPLIQKERV ALPPALIISA QLLMGVLFGL
MGLLLATPLA ALALALVREV YVHDYLEEGP AKAQGPDRAD