| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1945 |
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| Symbol | |
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| ID | 4895283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | - |
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| Start bp | 2063605 |
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| End bp | 2064885 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640112539 |
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| Product | ABC branched chain amino acid transporter, substrate binding protein |
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| Protein accession | YP_001043821 |
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| Protein GI | 126462707 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | [TIGR03407] urea ABC transporter, urea binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00107842 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATGT TCCGGGCATA TCTGATCGGC ACGGCCCTCG GTCTGTCGCT CGCGGGCGGG
GCGCTCGCGC AGGAGGACAC GATCAAGATC GGCGTGCTCC ATTCGCTCTC GGGCACGATG
GCGATTTCCG AGACGACGCT GAAGGACACC GTCCTGATGC TCGTCGATCA GCAGAACGCC
AAGGGCGGCC TTCTGGGCAA GAAGCTCGAG GCGGTGGTGG TGGACCCCGC CTCCGACTGG
CCGCTCTTCG CCGAGAAGGC GCGCGAACTG CTGACCGTGA ACGATGTCGA CGTGATCTTC
GGCTGCTGGA CCTCGGTCAG CCGCAAGTCG GTGCTGCCGG TGATCGAGGA GTTGAACGGC
CTCCTGTTCT ACCCGGTGCA GTATGAGGGC GAGGAGAGCT CGAAGAACGT CTTCTACACC
GGTGCCGCGC CGAACCAGCA GGCGATTCCG GCGGTGGACT ATTTCCTCGA GGAACTGGGC
GTCGAGAAAT TCGCCTTGCT CGGCACCGAC TACGTCTATC CGCGCACGAC GAACAACATC
CTCGAGAGCT ACCTTCAGCA GAAGGGCATC GCGAAATCCG ACATTTTCGT GAACTACACG
CCCTTCGGCC ATTCCGACTG GTCGAAGATC GTGGCGGACG TGAAGGCGCT CGGCGCGGAC
GGCAAGAAGG TGGGCGTGAT CTCGACCATC AACGGGGATG CGAACATCGG CTTCTACAAG
GAACTCGCGG CCGCAGGCAT CTCGGCCGAG GACATTCCCG TCGTGGCCTT CTCGGTGGGC
GAGGAGGAAC TCTCGGGCCT CGACACGTCG AACCTCGTGG GCCATCTCGC GGCCTGGAAC
TACTTCCAGT CCGCCGAAAG CCCCGAGAAC GAAGCCTTCA TCAAGGAATG GAAGGCCCGC
ATGGGTGAGA AGCGGGTGAC GAACGACCCG ATGGAGGCCA CCTACATCGG CTTCAACATG
TGGGTGAATG CCGTAACCGC GGCGGGCACC ACTGATGTGG ATCCGGTGGC CAAGGAGATG
ATCGGGCAGA AATTCCCGAA CCTCACCGGC TCCGAGGCCG AGATGCTGCC GAACCACCAT
CTGACCAAGC CCGTGCTGAT CGGCGAGATC CGCGACGACG GCCAGTTCGA CATCATCTCG
CAGACCGATC CGGTGCCGGG CGATGCCTGG ACGGACTTCC TGCCGGAATC GGCCGTGCTC
GAGTCCGACT GGGCCAAGCT CGACTGCGGC ATGTACAACA CCGAGACCAA GAGCTGCGTG
CAGATCAAGT CGAACTACTG A
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| Protein sequence | MKMFRAYLIG TALGLSLAGG ALAQEDTIKI GVLHSLSGTM AISETTLKDT VLMLVDQQNA
KGGLLGKKLE AVVVDPASDW PLFAEKAREL LTVNDVDVIF GCWTSVSRKS VLPVIEELNG
LLFYPVQYEG EESSKNVFYT GAAPNQQAIP AVDYFLEELG VEKFALLGTD YVYPRTTNNI
LESYLQQKGI AKSDIFVNYT PFGHSDWSKI VADVKALGAD GKKVGVISTI NGDANIGFYK
ELAAAGISAE DIPVVAFSVG EEELSGLDTS NLVGHLAAWN YFQSAESPEN EAFIKEWKAR
MGEKRVTNDP MEATYIGFNM WVNAVTAAGT TDVDPVAKEM IGQKFPNLTG SEAEMLPNHH
LTKPVLIGEI RDDGQFDIIS QTDPVPGDAW TDFLPESAVL ESDWAKLDCG MYNTETKSCV
QIKSNY
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