Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_1941 |
Symbol | |
ID | 4895136 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 2058579 |
End bp | 2059277 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640112535 |
Product | ABC transporter related |
Protein accession | YP_001043817 |
Protein GI | 126462703 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | [TIGR03410] urea ABC transporter, ATP-binding protein UrtE |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.174596 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCTGA AGACCGAAGC GCTGACCCTG CATTACGGCG GCAGCCAGAT TCTCCACGGG ATCGACATGG AGGCGCGCGC GGGCGAGGTG ACCTGCATCA TGGGCACGAA CGGGGTGGGC AAGACCTCGC TCCTGAAGGC GATCGCCGGC ACGCATCCGC GCTCGGGCGG GCGGATCTTC CTCGAAGGCG CAGAGCTGCC GGTGCTGCCG CCGCAGGCCA TGGCGCGGCG GGGCCTCGGC TTCGTGCCGC AGGGGAGGAT GATCTTTCCG CTCCTGACGG TGACGGAGAA TCTCGAGACC GGCTTTGCGG TCCTTCCCCG CGCCGATCAT CGGATCCCGG AGGAGATCTA TGCCCTCTTC CCGGTCCTGA AGGACATGGC CCACCGCCGC GGCGGCGATC TCTCCGGCGG CCAGCAGCAG CAGCTCGCCA TCGCGCGGGC CCTGATCATG CGGCCGAAGC TCCTCCTCCT CGACGAGCCG ACCGAGGGGA TCCAGCCCAA CATCATCCAG CAGATCGGCC GCGTGATCTC CTATCTGAGG GAGAAGGGCG ACATGGCCAT TGTCCTCGTC GAGCAGTATT TCGACTTCGC CTACGACCTT GCGGACCGGT TCTACGTCCT CAAGCGCGGC GCGGTGGACC TGTCGGGCAC CAGAGCCGAG CTCGGGCGCG ACCGGCTGAA GCAGGCGGTG TCGGTCTGA
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Protein sequence | MMLKTEALTL HYGGSQILHG IDMEARAGEV TCIMGTNGVG KTSLLKAIAG THPRSGGRIF LEGAELPVLP PQAMARRGLG FVPQGRMIFP LLTVTENLET GFAVLPRADH RIPEEIYALF PVLKDMAHRR GGDLSGGQQQ QLAIARALIM RPKLLLLDEP TEGIQPNIIQ QIGRVISYLR EKGDMAIVLV EQYFDFAYDL ADRFYVLKRG AVDLSGTRAE LGRDRLKQAV SV
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