Gene Rsph17029_1941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1941 
Symbol 
ID4895136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp2058579 
End bp2059277 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content67% 
IMG OID640112535 
ProductABC transporter related 
Protein accessionYP_001043817 
Protein GI126462703 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID[TIGR03410] urea ABC transporter, ATP-binding protein UrtE 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.174596 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCTGA AGACCGAAGC GCTGACCCTG CATTACGGCG GCAGCCAGAT TCTCCACGGG 
ATCGACATGG AGGCGCGCGC GGGCGAGGTG ACCTGCATCA TGGGCACGAA CGGGGTGGGC
AAGACCTCGC TCCTGAAGGC GATCGCCGGC ACGCATCCGC GCTCGGGCGG GCGGATCTTC
CTCGAAGGCG CAGAGCTGCC GGTGCTGCCG CCGCAGGCCA TGGCGCGGCG GGGCCTCGGC
TTCGTGCCGC AGGGGAGGAT GATCTTTCCG CTCCTGACGG TGACGGAGAA TCTCGAGACC
GGCTTTGCGG TCCTTCCCCG CGCCGATCAT CGGATCCCGG AGGAGATCTA TGCCCTCTTC
CCGGTCCTGA AGGACATGGC CCACCGCCGC GGCGGCGATC TCTCCGGCGG CCAGCAGCAG
CAGCTCGCCA TCGCGCGGGC CCTGATCATG CGGCCGAAGC TCCTCCTCCT CGACGAGCCG
ACCGAGGGGA TCCAGCCCAA CATCATCCAG CAGATCGGCC GCGTGATCTC CTATCTGAGG
GAGAAGGGCG ACATGGCCAT TGTCCTCGTC GAGCAGTATT TCGACTTCGC CTACGACCTT
GCGGACCGGT TCTACGTCCT CAAGCGCGGC GCGGTGGACC TGTCGGGCAC CAGAGCCGAG
CTCGGGCGCG ACCGGCTGAA GCAGGCGGTG TCGGTCTGA
 
Protein sequence
MMLKTEALTL HYGGSQILHG IDMEARAGEV TCIMGTNGVG KTSLLKAIAG THPRSGGRIF 
LEGAELPVLP PQAMARRGLG FVPQGRMIFP LLTVTENLET GFAVLPRADH RIPEEIYALF
PVLKDMAHRR GGDLSGGQQQ QLAIARALIM RPKLLLLDEP TEGIQPNIIQ QIGRVISYLR
EKGDMAIVLV EQYFDFAYDL ADRFYVLKRG AVDLSGTRAE LGRDRLKQAV SV