| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1731 |
|---|
| Symbol | |
|---|
| ID | 4897512 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | + |
|---|
| Start bp | 1825366 |
|---|
| End bp | 1826136 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640112324 |
|---|
| Product | sorbitol dehydrogenase |
|---|
| Protein accession | YP_001043613 |
|---|
| Protein GI | 126462499 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.311786 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCTCG ACGGCAAGAC CGCCCTCATC ACCGGCTCGG CTCGCGGCAT CGGCCGCGCC
TTCGCCGAGG CCTATGTGCG CGAAGGCGCG CGCGTGGCCA TCGCCGACAT CAACCTCGAG
GCAGCCCGCG CCACCGCCGC CGACATCGGC CCCGCGGCCT GCGCCATCGG CCTCGACGTG
ACCGATCAGG CCAGCATCGA CCGCTGCGTG GCCGAGCTCC TCGACCGCTG GGGCCGCATC
GACATCCTCG TGAACAATGC GGCCCTGTTC GATCTGGCAC CCATCGTTGA GATCACCCGC
GAGAGCTACG ACCGGCTGTT CACCATCAAC GTCTCGGGCA CGCTCTTCAT GATGCAGGCG
GTGGCGCGGG CGATGATCGC GGGCGGCCGG GGCGGCAAGA TCATCAACAT GGCAAGCCAG
GCCGGCCGCC GTGGCGAGGC GCTGGTGGGC GTCTATTGCG CGACCAAGGC CGCCGTCATC
TCGCTCACCC AGAGCGCGGG GCTGAACCTC ATCCGCCACG GGATCAACGT CAATGCCATC
GCGCCGGGCG TGGTAGACGG CGAGCACTGG GACGGGGTGG ATGCGAAGTT CGCCGAATAC
GAGAACCTGC CGCGCGGCGA GAAGAAGCGT CAGGTCGGTG CGGCGGTGCC CTTCGGCCGC
ATGGGCCGCG CCGAGGACCT GACCGGCATG GCGATCTTCC TCGCCACGCC CGAGGCCGAC
TACATCGTGG CCCAGACCTA CAACGTGGAC GGCGGCAACT GGATGAGCTG A
|
|---|
| Protein sequence | MRLDGKTALI TGSARGIGRA FAEAYVREGA RVAIADINLE AARATAADIG PAACAIGLDV
TDQASIDRCV AELLDRWGRI DILVNNAALF DLAPIVEITR ESYDRLFTIN VSGTLFMMQA
VARAMIAGGR GGKIINMASQ AGRRGEALVG VYCATKAAVI SLTQSAGLNL IRHGINVNAI
APGVVDGEHW DGVDAKFAEY ENLPRGEKKR QVGAAVPFGR MGRAEDLTGM AIFLATPEAD
YIVAQTYNVD GGNWMS
|
|---|
| |