Gene Rsph17029_1729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1729 
Symbol 
ID4896549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp1823528 
End bp1824358 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content64% 
IMG OID640112322 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001043611 
Protein GI126462497 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.11102 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACGCC GCACCTCAAC CCGCCGCACG CTGATCGTCA CGCTCGCCGC CTGGACGGTC 
GCCTTCCTCA TCTTCTTCCC GATCCTCTGG ACGGTGCTGA TGAGCTTCAA ATCGGAAGGA
GACGCCATCA AGGCGCCCTT CGCCATGCTC TTCTCGGACT GGACCCTGCA ATCCTACGCC
GATGTGCAGG AACGGTCGAA CTACGCGCGC CACTTCATGA ATTCGGTGGT GATCTCGCTG
GGTTCGACCC TGGTGGCGCT CGTCATCGCG ATCCCCGCCG CCTGGGCCAT GGCCTTCGTG
CCGGGCCGGC GGACGAAGGA CGTGCTGATG TGGATGCTGT CGACCAAGAT GATGCCGGCG
GTGGGCGTGC TCATCCCGCT CTATCTGATC TTCCGCGACA CGGGCCTTCT CGACACGCGG
ATCGGCCTCG TGATCGTGCT CACGCTCATC AACCTGCCGA TCGTGGTCTG GATGCTCTAC
ACCTACTTCA AGGAGATCCC GGGCGAGATC CTCGAGGCCG CGCGGATGGA CGGGGCGACG
CTCGGCTCCG AGATTCTCTA TATCCTCACG CCGATGGCCG TGCCGGGCAT CGCCTCGACG
CTGCTTCTGA ACGTGATCCT CGCCTGGAAC GAGGCCTTCT GGACGCTGCA GCTGACCACC
TCGCGGGCGG CCCCGCTCAC GCAGTTCATC GCGAGCTATT CCAGCCCCGA GGGCCTCTTC
TACGCCAAAC TGTCGGCGGC CTCGACCATG GCCATCGCGC CGATCCTGAT CCTTGGCTGG
TTCAGCCAGA AACAACTCGT CCGCGGCCTG ACCTTCGGCG CGGTGAAGTG A
 
Protein sequence
MSRRTSTRRT LIVTLAAWTV AFLIFFPILW TVLMSFKSEG DAIKAPFAML FSDWTLQSYA 
DVQERSNYAR HFMNSVVISL GSTLVALVIA IPAAWAMAFV PGRRTKDVLM WMLSTKMMPA
VGVLIPLYLI FRDTGLLDTR IGLVIVLTLI NLPIVVWMLY TYFKEIPGEI LEAARMDGAT
LGSEILYILT PMAVPGIAST LLLNVILAWN EAFWTLQLTT SRAAPLTQFI ASYSSPEGLF
YAKLSAASTM AIAPILILGW FSQKQLVRGL TFGAVK