Gene Rsph17029_1723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1723 
Symbol 
ID4897888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp1817911 
End bp1818633 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content62% 
IMG OID640112316 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_001043605 
Protein GI126462491 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGGAA GGCTCGACTT TTCGGAGACT ACTCCTCCGG CACGGCCGAG GCCCCCGAAG 
GTTTGCGTGC AGGATAGAAG CGAGCGTATC ATGACCCAGA CGCCCCAAAA GCTCAGCGTT
CTCATTGCCG ACGATCACGA GATGGTCGTC GAGATGTTCT CGCTCTTTTT GACCGCATCC
TCGGAGATGA CCGTGAAGAC CGCCAAGAGC CTCGACGAGG CTCTCGAGCG GATCAAGGAA
CACGGGCCCT TCGACGTCAC CCTTCTCGAT CTGAACATGC CCGGAATGAA CGGGGTCGCC
GGCCTCGTGC GGGCGATCAA GCTGTCCGCG GGCAAGCCGG TCGCGATCCT GACCTCGAAC
CCGACCCCGC GGATGGTGGA TGAGATCCTT GCCACCGGCG CCTCGGGGAT CGTGCTCAAG
ACGACGCCCG TGCGCAGCCT CGGCAATGCG ATCCGGTTCA TGCATGCGGG CGAGCATTAC
CTGCCGCTCG AGCTGGCGCG CGATCGGCGT CAGGCCCCCG ACAGCTCGGG CGGACGGCTT
ACGGAAAAGG AGATGCTCGT CATGTCCTAT CTGGCGGAAG GGCGCCAGAA CAAGGAGATA
GCGCACGGGC TTAATCTTGC CGAACCGACG ATCAAGATGC ATGTGAAGTC GATCTGCAAG
AAGCTGGGCG CCACGAACCG CACGCAGGCC GTGGTGACGG CACGCAATCT CGGCATCATC
TGA
 
Protein sequence
MEGRLDFSET TPPARPRPPK VCVQDRSERI MTQTPQKLSV LIADDHEMVV EMFSLFLTAS 
SEMTVKTAKS LDEALERIKE HGPFDVTLLD LNMPGMNGVA GLVRAIKLSA GKPVAILTSN
PTPRMVDEIL ATGASGIVLK TTPVRSLGNA IRFMHAGEHY LPLELARDRR QAPDSSGGRL
TEKEMLVMSY LAEGRQNKEI AHGLNLAEPT IKMHVKSICK KLGATNRTQA VVTARNLGII