Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_1708 |
Symbol | |
ID | 4897627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 1800292 |
End bp | 1801089 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640112301 |
Product | lytic transglycosylase, catalytic |
Protein accession | YP_001043590 |
Protein GI | 126462476 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0133415 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCACGGC CCTTGCCCGG GAGGGGCATG AGGTTCGCGC TCGTCCTGAT CCTGACGCTT CTGGCCGCCC CCGCGCTCGC GGCGGACGAG GGCTGCGAGA CGCTCGCGGC CCGGGCCGGT GCCGAGGCCG GCATACCCGA GGGGCTGATG GAGGCGATTG CCCGCGTGGA ATCGGGCCGG GGCGGGCGCG CCTGGCCCTG GACGCTGAAC CAGGGCGGGC GCGGCATGTT CTTCGAGACC CGGGCCGAGG CGGTGCGCAT GCTCCAAGCG ACGGTCGCCT CGGGCGTGTC CAACATCGAC GTGGGCTGCA TGCAGCTCAA CTGGCGCTGG CATGCGCCCG CCTTCGCCTC GGCCGACGAG ATGATCGATC CAGTGCGCAA CACCCGCCAT GCGGCGCGCT TCCTGCGCGA ACTCCGCGCC CGTCTCGGCT CGTGGGAGGC GGCGACGGCG GCCTATCATT CGGCCGATCG CGGGCGGGGC GCGGCCTATC TCGCCAAGGT CGAGGCCGAG CGCGGCGGAT CGCGCCTGGC CGAGGCCGCG ACGGACCTGC CCGACGAGGC GACCCTCGCC GCCGCGCGCG TCCAGGGCCT CCTCGTGCTG GCTCCGCAGC CGATGGTGAG CCTCGGCGAG ACGCAGGGAG GGCTGCCCCG GGCGGCCTCC GACATTCCCT CGCAGGGGCC TCTGGAGCTT CGCGCAGCCG CCCCGGACCT CCTCGCCGAG GCGGACCTTC CGCAGCGCCT GCGCGCCCGG TTCCACGCGG TCCAGTCCTT CCGCGACCTG CTCGCAATGC AACCGTGA
|
Protein sequence | MARPLPGRGM RFALVLILTL LAAPALAADE GCETLAARAG AEAGIPEGLM EAIARVESGR GGRAWPWTLN QGGRGMFFET RAEAVRMLQA TVASGVSNID VGCMQLNWRW HAPAFASADE MIDPVRNTRH AARFLRELRA RLGSWEAATA AYHSADRGRG AAYLAKVEAE RGGSRLAEAA TDLPDEATLA AARVQGLLVL APQPMVSLGE TQGGLPRAAS DIPSQGPLEL RAAAPDLLAE ADLPQRLRAR FHAVQSFRDL LAMQP
|
| |