| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1704 |
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| Symbol | |
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| ID | 4897364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | - |
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| Start bp | 1794121 |
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| End bp | 1795437 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640112297 |
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| Product | RNA polymerase, sigma 54 subunit, RpoN |
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| Protein accession | YP_001043586 |
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| Protein GI | 126462472 |
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| COG category | [K] Transcription |
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| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
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| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000294974 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCAGCTTT ACACCGCACA GAGCTTCGCA CAGCGCCAGT CGCTCGTGGT GACGGCACAG
CTCCAGCAGG CCATCTGCCT GCTGCAGATG CCGAACGCCG AGCTGTCCTC GTTCATCGAG
AGCCAGTCGG AGGAAAACCC TTTCATTGAA CTGCGCCTGC CGCCGGCGCC GGTGCCGTCC
GCCCCTCTGG GCAAAACCGC ACCCGAGGAC TGGGACCGCG TGGCAGGGCT TGCCGCCGAT
CCGGGGCCGT CGCTCTATGT GCATGTGGCC GCCGAGATCG CGCGTCTGGG GCTCGATGCC
CCGCAAGCGG CGGCCGCCCA GGTCTTTCTC GACGCGCTCG AACCCTGGGG CTGGCTCGGT
CGCCCGATGG AGGAACTTGC CTTCCGCGCG GGCCTGTCGC TCGAGGCGGC CGAGGCGCTG
CTCGCCCGGC TTCAGAAGAT CGAACCCGCA GGGCTCTTTG CGCGCACGCT TGCCGAATGC
CTGCGGCTTC AGGCGGAAGA GCAGGGGCTG CTCACCCCGC TGTTCGCCGC CGTTCTCGCG
CATCTCCCGC TGCTGGCTGC GGCCGATCTC AAGGGCCTGT GCCGCGCTTG CGGCTGCGGG
ATGGAGGATC TGAAGGCCGT GCTGCGCAGC CTGCGCGGTC TCAATCCCAA GCCGGGCGCG
CTGTTCGATG CCGCCCCTCC GCCCCAGCGA CCGCCGGATC TGTTGGTCAG CCGCGGCGCC
GAAGGCTGGC GGGTGGATCT GAACCGCTCG ACGCTGCCGT CCGTCGTGGT GCGCTCGGAT
GCGGCGGAAG GCTTCGCCCG GACGGCCGCG CCCTATGTGG GCGAGCGGCT GTCGGTCGCG
AAGTGGCTTG CAAGGGCCGT CGAGCACCGC AACCAGACCA CGCTCAAGAT CGGCGCCGAG
GTGGTCCGCC GTCAGCGCGG CTTCCTCGAG GAGGGGCTGG CGCGCATGGC GCCCATGACG
CTGCGCGAAG TGGCCGATGC GGTGGGCGTG CATGAGAGCA CCGTCAGCCG GGTGAGCTCG
GGGCTGATGA TCGCCACGCC GCAGGGCACC TTCCCGCTGA AGTCGTTTTT CACCGCAGCG
CTGGCCGCCC GCGAGGGCGA CACGGCGGGA TCGGCCGCCG CTGTCCGGCA CCGCGTCCGC
CAGCTCGTGC AGGCGGAATC GCCCGACGAT CCGCTGAGCG ACGATGCGAT CGCAAAGATC
ATTTCCGACG AGGGCGTGAC GCTCGCCCGG CGCACCGTCG CCAAATATCG CGAGCAGCTG
AACATCCCCT CGTCGGTGCA GCGCCGCCGT CAGGCCATCG TCACCGGCGC ACTCTGA
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| Protein sequence | MQLYTAQSFA QRQSLVVTAQ LQQAICLLQM PNAELSSFIE SQSEENPFIE LRLPPAPVPS
APLGKTAPED WDRVAGLAAD PGPSLYVHVA AEIARLGLDA PQAAAAQVFL DALEPWGWLG
RPMEELAFRA GLSLEAAEAL LARLQKIEPA GLFARTLAEC LRLQAEEQGL LTPLFAAVLA
HLPLLAAADL KGLCRACGCG MEDLKAVLRS LRGLNPKPGA LFDAAPPPQR PPDLLVSRGA
EGWRVDLNRS TLPSVVVRSD AAEGFARTAA PYVGERLSVA KWLARAVEHR NQTTLKIGAE
VVRRQRGFLE EGLARMAPMT LREVADAVGV HESTVSRVSS GLMIATPQGT FPLKSFFTAA
LAAREGDTAG SAAAVRHRVR QLVQAESPDD PLSDDAIAKI ISDEGVTLAR RTVAKYREQL
NIPSSVQRRR QAIVTGAL
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