Gene Rsph17029_1585 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1585 
Symbol 
ID4896682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp1666352 
End bp1667146 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content66% 
IMG OID640112176 
Productchromosome segregation and condensation protein ScpA 
Protein accessionYP_001043467 
Protein GI126462353 
COG category[S] Function unknown 
COG ID[COG1354] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.230404 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.243031 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCATGG CTGACGTTTG GGAAGAGACT TCGGTCCTCA GCGTCGCGGA CCGTCTGGCG 
GCCGAGGCGC TGATCGTGGA TGTCGAGGGC TTCGAGGGGC CGCTCGACCT TCTGCTCACG
CTCTCGCGCA CGCAGAAGGT CGACCTGCGG CGGATCTCGG TGCTGAAGCT CTCGGAGCAG
TATCTGCTTT TCGTCAATCA CGCCAAGCAG TTGCGGATCG AACTTGCGGC CGATTATCTG
GTGATGGCAG CCTGGCTCGC CTATCTGAAA AGCCGGCTTC TGCTGCCGCC GGACCCGACC
GAGGAAGGTC CGTCGGCCGA GGAACTCGCC GCGCATCTGG CCTTCCAGCT CGAGCGGCTG
GAAGCCATGC GGGATGCCGC CGCCCGGCTG ATGGCGCGTG ACCAGAAGGG GCGCGACTTC
TTTCCGCGCG GCCTGCCCGA GGATGTGACG CGGCACCGCA AGGTGACCTA CACCGCCACA
TTGATCGATC TGATGCGGGC CTATGCCCGT ATCCGCACTA AGGACGAGTT CCGGCCCTTC
GTCATGGACC GCCACCATGT CTTCACCATG GAGCAGGCGC TCGACCGGAT GCGGGGGATG
CTGGGCTGGT TCGGCGACTG GGCCGAACTC ACGAGCTACC TGCCCGAGGG CTGGGACGGC
CATCCGATGC GCCGCCGCTC GGCCACCGCC GCCCATTTCG CCGCCGTGCT GGAAATGACG
AAGCGCGGGC AGATCGAGCT GCGGCAGGGC GAGACCTTCG CGCCGATCCT GATCCGCCGC
AGGGAGGGGG CATGA
 
Protein sequence
MGMADVWEET SVLSVADRLA AEALIVDVEG FEGPLDLLLT LSRTQKVDLR RISVLKLSEQ 
YLLFVNHAKQ LRIELAADYL VMAAWLAYLK SRLLLPPDPT EEGPSAEELA AHLAFQLERL
EAMRDAAARL MARDQKGRDF FPRGLPEDVT RHRKVTYTAT LIDLMRAYAR IRTKDEFRPF
VMDRHHVFTM EQALDRMRGM LGWFGDWAEL TSYLPEGWDG HPMRRRSATA AHFAAVLEMT
KRGQIELRQG ETFAPILIRR REGA