| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1536 |
|---|
| Symbol | |
|---|
| ID | 4897685 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | - |
|---|
| Start bp | 1612814 |
|---|
| End bp | 1615255 |
|---|
| Gene Length | 2442 bp |
|---|
| Protein Length | 813 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 640112126 |
|---|
| Product | heavy metal translocating P-type ATPase |
|---|
| Protein accession | YP_001043418 |
|---|
| Protein GI | 126462304 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2217] Cation transport ATPase
[COG2608] Copper chaperone |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.627747 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACC AACAACCGAT CCGCACGGGC CTGCGCAGCC TGCGCCTGCA CCCGGACGGA
ATGAGCTGCG CCTCCTGTGT GGCGCGCACC GAGCGCGTGC TTGCCGCGGT GCCGGGCGTG
ACCGAGGCGC GGGTGAGCCT CGCGGACGAG AGCGCGGACA TCCGCTATTC CGATCCGGCC
ACGCCGGAGG CTCTGGCCGA GGCGCTGGAG CGCGCGGGCT ACCCGGCCCG GCAGGAACGG
TTCACCCTCT CGGTCGAGGG GATGAGCTGC GCCTCCTGCA CCGGTCGGGT CGAGCGGGTG
CTGAAGGCGC AGCCGGGGGT GATCGAAGCC ACGGCGAACC TCGCGAGCCG CCGCGCGCAG
GTGACGCTCT GGGAGGGCGC GGCCACGGCC GCCGCCCTCG CGCAGGCCGT CACCAAGGCC
GGGTTTGCGG CCTCGCCCCT CACGGCCGAT GCCCCGGATC GCCGCGCCGA GGAGATGGCG
ATGCTCCGCC GCGATGCCTG GCTCGCGGCG CTGCTGACGA TCCCGGTGTT CCTCGTCGAG
ATGGGCGGCC ATCTCGTGCC CGCCTTCCAC CACTGGATCG CGGGCACCAT CGGCACGCAG
ACCTCGTGGA TCGTGCAGTT CCTGCTCACG AGCCTCGTGC TGGCGGGGCC CGGGCGGCGC
TTCTATGCCA AGGGCGTACC GGCGCTCCTG CGCGGGGCGC CCGACATGAA CAGCCTCGTG
GCCGTCGGCA CCTTCGCGGC CTGGGCCTAC TCGACGGTCG CGACCTTCGC GCCGGGCCTC
CTGCCCGCAG CCGCCCGCTC GGTCTATTTC GAGGCCGCGG CGGTGATCGT CGTGCTGATC
CTGCTCGGCC GGCTGATGGA GGCGCGCGCG CGCGGACAGG CGGGGGCCGC CATCGCGGGG
CTCCTGCGCC TCCAGCCGAA GACGGCGCGG GTGAGCCGCG ACGGCACGGA GACCGAGGTG
CCGATCGAGA GCATCGGGCC CGGCGCGATC CTTCTCATCC GTCCGGGCGA ACGCATTCCG
CTCGACGGGG TGGTGGTGGC GGGCGAGAGC GCGGTCGACG AGAGCATGCT GACCGGCGAG
GCGCTGCCGG TGGCCAAGGC CGCGGGGGCC GATGTCACCG GAGGCACGGT GAACGGCACC
GGGGCCCTCA CCATGCGGGC GACGCGGGTC GGCGCCGATA CGGTGCTGGC GCGGATCGTG
GCCATGGTCG GAGAGGCGCA GGGCGCCAAG CTGCCGGTGC AGGCGCTGGT CGACCGGATC
ACGCTGCGCT TCGTGCCGGT GGTGATGGGC GTGGCGGCGC TCACGGTGCT CGTCTGGCTC
CTGTTCGGGC CGGGCCTTGG CGAGGCGCTG GTCGCGGGCG TCTCGGTCCT CATCATCGCC
TGCCCCTGCG CGATGGGGCT GGCGACGCCG GTCTCGATCA TGGTCGGCAC CGGCCGGGCC
GCCGAGCTGG GCGTGCTCTT CCGCAAGGGC GAGGCGTTGC AGCGGCTGTC CGAAATCGAG
CGGGTGGGGT TCGACAAGAC CGGCACGCTC ACCGAAGGCC GGCCGCAGGT GACCGACGTC
CTGCCCGGCG AGGGGATGGG CCGCGAGGAG CTTCTGGTGC TGGCTGCGGC CGTCGAGGCC
CGGTCGGAAC ATCCGCTGGC CGGCGCGATC CGGCGCGCGG CCGAGGGCCT TGCGCCGCTC
GAGGCTGAGG GCTTCTCCTC CCGGCCCGGA CATGGTGCCG AGGCGCGCGT GGCGGGCCGC
CGCGTTCGAG TGGGCAGCCT CCGGATGATG GAGGGGCTGG ATCCGGGCCC GCTCGGGCCC
GAGGCGGCGC GGCTCGAGGC CGAAGGGCGC ACGCCGGTCT GGCTCGCTCT GGATGACCGG
ATCGCCGGGC TGATCGGCGT GGCCGACCGG GTGAAGCCCA CGGCGCGGGC GGCGGTCGAG
GCGCTCGGGC GGCTGGGCCT GCCCGCCGCG ATGGTCACGG GAGATGCCCC GGGCGTCGCG
CGCGCCATCG GACGGGAGCT CGGGATCTCG GACATCCACG CGGGTGTCCT GCCCGGCGGA
AAGGTCGAGG AGGTGACGGC CATGGGCCGG GCGGCCTTCG TGGGCGACGG GATCAACGAT
GCGCCGGCGC TCGCCGCAGC CGAGGTGGGC ATCGCCATCG GCACGGGCAC CGATGTGGCC
ATCGAGGCCG CGGATGTGGT GCTCATGTCG GGCGATCCGG TGGGCGTGGC CACGGCGGTG
GCGCTCAGCC GCCGGACCAT GCGCAACATC CGCCAGAACC TCGGCTGGGC CTTCGGCTAC
AATGTGGCGC TGATCCCGGT GGCCGCCGGG GTGCTGGTGC CGTTCGGCGG GCCGCAGCTC
TCGCCGATGC TCGCGGCGGG GGCGATGGCC TTCTCGTCGG TCTTCGTGCT GACGAACGCG
CTGCGCCTGC GCCGCGCGCC CGCGGCGGAG GCTCGGGCGT GA
|
|---|
| Protein sequence | MTDQQPIRTG LRSLRLHPDG MSCASCVART ERVLAAVPGV TEARVSLADE SADIRYSDPA
TPEALAEALE RAGYPARQER FTLSVEGMSC ASCTGRVERV LKAQPGVIEA TANLASRRAQ
VTLWEGAATA AALAQAVTKA GFAASPLTAD APDRRAEEMA MLRRDAWLAA LLTIPVFLVE
MGGHLVPAFH HWIAGTIGTQ TSWIVQFLLT SLVLAGPGRR FYAKGVPALL RGAPDMNSLV
AVGTFAAWAY STVATFAPGL LPAAARSVYF EAAAVIVVLI LLGRLMEARA RGQAGAAIAG
LLRLQPKTAR VSRDGTETEV PIESIGPGAI LLIRPGERIP LDGVVVAGES AVDESMLTGE
ALPVAKAAGA DVTGGTVNGT GALTMRATRV GADTVLARIV AMVGEAQGAK LPVQALVDRI
TLRFVPVVMG VAALTVLVWL LFGPGLGEAL VAGVSVLIIA CPCAMGLATP VSIMVGTGRA
AELGVLFRKG EALQRLSEIE RVGFDKTGTL TEGRPQVTDV LPGEGMGREE LLVLAAAVEA
RSEHPLAGAI RRAAEGLAPL EAEGFSSRPG HGAEARVAGR RVRVGSLRMM EGLDPGPLGP
EAARLEAEGR TPVWLALDDR IAGLIGVADR VKPTARAAVE ALGRLGLPAA MVTGDAPGVA
RAIGRELGIS DIHAGVLPGG KVEEVTAMGR AAFVGDGIND APALAAAEVG IAIGTGTDVA
IEAADVVLMS GDPVGVATAV ALSRRTMRNI RQNLGWAFGY NVALIPVAAG VLVPFGGPQL
SPMLAAGAMA FSSVFVLTNA LRLRRAPAAE ARA
|
|---|
| |