Gene Rsph17029_1488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1488 
Symbol 
ID4896292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp1551302 
End bp1552075 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content66% 
IMG OID640112077 
ProductABC transporter related 
Protein accessionYP_001043370 
Protein GI126462256 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.437472 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAAAG AGGTTCTGAT CGAGGTCCGG GGGCTGAAGA ACCAGTTCGG GCCGAACGTG 
ATCCACGAGG ATCTGGATCT CGACATCTAT CGTGGCGAGG TGCTGGGGAT CGTCGGCGGA
TCCGGCACCG GCAAGTCGGT GCTCCTGCGC TCCATCGTCG GGCTTCAGGC GCCGCGGGCG
GGCAGCGTGA AGGTCTTCGG CACCGATGTG CGCACGGCAT CGAAGGCCGA GATGGCCAAG
GTCGAGAACC GCTGGGGCGT GATGTTTCAG GACGGGGCGC TCTTCTCCTC GCTCACGGTG
CGAGAGAATG TCGAGGCCCC GATGCGCGAA CGCACGGGCC TCGATCCCGA AACGCGCACG
GCGCTGGCCG ATCTCAAGAT CGCCATGGTG GGCCTGCCGC CCAAGGCGCG CAGCCTCTAT
CCGTCCGAGC TCTCGGGGGG GATGCGCAAG CGGGCAGGGC TTGCGCGGGC GCTTGCGCTC
GACCCGGACA TCGTGTTCCT CGACGAGCCG ACGGCGGGTC TCGACCCGAT CGGCGCCTCC
GAGTTCGACG CGCTGATCCG CAACCTGCAG ACATCTCTGG GGCTGACCGT GTTCCTCGTG
ACGCACGATC TCGATACGCT CCATGCAACC TGCGACCGCA TCGCGGTCCT GGCCGAAAGG
AAAGTTCTGG TGACGGGAAC CATCCGCGAG CTGATGGAGG TAGATCACCC GTGGGTCCGC
GAGTATTTCC ACGGTCCGCG CGCCCATGCG GCGCTTGTGG CGGCGGAGGG CTGA
 
Protein sequence
MQKEVLIEVR GLKNQFGPNV IHEDLDLDIY RGEVLGIVGG SGTGKSVLLR SIVGLQAPRA 
GSVKVFGTDV RTASKAEMAK VENRWGVMFQ DGALFSSLTV RENVEAPMRE RTGLDPETRT
ALADLKIAMV GLPPKARSLY PSELSGGMRK RAGLARALAL DPDIVFLDEP TAGLDPIGAS
EFDALIRNLQ TSLGLTVFLV THDLDTLHAT CDRIAVLAER KVLVTGTIRE LMEVDHPWVR
EYFHGPRAHA ALVAAEG