Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_1420 |
Symbol | |
ID | 4896520 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 1474127 |
End bp | 1474795 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640112008 |
Product | invasion associated locus B family protein |
Protein accession | YP_001043302 |
Protein GI | 126462188 |
COG category | [R] General function prediction only |
COG ID | [COG5342] Invasion protein B, involved in pathogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.170332 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAGCA AGCAACTGAA AACCCTCTGC GTCATGGCTC TGGGCCTAGC CCTTGCGCCC GCCGCCTGGG CACAGGACAC GCCGGCCGCC CCGGCCGCCG ACGCTCCCGC CGCGCAGGCG CCCGCCGAAG GCGCCGCGGC TCCGCAGGGG CTGTCCATGG GTCAGGAAGA CCCGGCCGAC GGGATCGGCT CCACCTATGT CGCCGCGACC CACGGCGACT GGGAACAGCG CTGCGTCCGC ACCGAGGACG GTGCCGACCC GTGCCAGATG TATCAGCTTC TCAAGGACGG CGAAGGCAAC TCGGTGGCCG AGATCAGCAT GTTCGCCCTG CCCGCGGGCC AGCAGGCCGC GGCCGGCGCG ACCATCGTGG CGCCGCTCGA GACGCTGCTG ACCGCCAATC TGACGATGGG CGTCGATGCG GCCAAGCCGA AGGTCTATCC CTTCTCCTGG TGCAACCGCG CGGGCTGCTT CGCGCGCGTG GGCTTCACCC AGGCCGAGGT GGATGCCTTC AAGAAGGGCA ACAAGAGCGT CGTGACCATC GTGCCGGCTG TGGCGCCGGA TCAGAAGGTC GCGCTGAACG TCTCGCTGAA AGGCTTCACC GCCGCCTATG ACGCGGTGAA GGCCTCGAAC GAGAAGGCCG AAGCGGCCCA GAAGCCAGCC GCGGAATAA
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Protein sequence | MSSKQLKTLC VMALGLALAP AAWAQDTPAA PAADAPAAQA PAEGAAAPQG LSMGQEDPAD GIGSTYVAAT HGDWEQRCVR TEDGADPCQM YQLLKDGEGN SVAEISMFAL PAGQQAAAGA TIVAPLETLL TANLTMGVDA AKPKVYPFSW CNRAGCFARV GFTQAEVDAF KKGNKSVVTI VPAVAPDQKV ALNVSLKGFT AAYDAVKASN EKAEAAQKPA AE
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