Gene Rsph17029_1420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1420 
Symbol 
ID4896520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp1474127 
End bp1474795 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content69% 
IMG OID640112008 
Productinvasion associated locus B family protein 
Protein accessionYP_001043302 
Protein GI126462188 
COG category[R] General function prediction only 
COG ID[COG5342] Invasion protein B, involved in pathogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.170332 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAGCA AGCAACTGAA AACCCTCTGC GTCATGGCTC TGGGCCTAGC CCTTGCGCCC 
GCCGCCTGGG CACAGGACAC GCCGGCCGCC CCGGCCGCCG ACGCTCCCGC CGCGCAGGCG
CCCGCCGAAG GCGCCGCGGC TCCGCAGGGG CTGTCCATGG GTCAGGAAGA CCCGGCCGAC
GGGATCGGCT CCACCTATGT CGCCGCGACC CACGGCGACT GGGAACAGCG CTGCGTCCGC
ACCGAGGACG GTGCCGACCC GTGCCAGATG TATCAGCTTC TCAAGGACGG CGAAGGCAAC
TCGGTGGCCG AGATCAGCAT GTTCGCCCTG CCCGCGGGCC AGCAGGCCGC GGCCGGCGCG
ACCATCGTGG CGCCGCTCGA GACGCTGCTG ACCGCCAATC TGACGATGGG CGTCGATGCG
GCCAAGCCGA AGGTCTATCC CTTCTCCTGG TGCAACCGCG CGGGCTGCTT CGCGCGCGTG
GGCTTCACCC AGGCCGAGGT GGATGCCTTC AAGAAGGGCA ACAAGAGCGT CGTGACCATC
GTGCCGGCTG TGGCGCCGGA TCAGAAGGTC GCGCTGAACG TCTCGCTGAA AGGCTTCACC
GCCGCCTATG ACGCGGTGAA GGCCTCGAAC GAGAAGGCCG AAGCGGCCCA GAAGCCAGCC
GCGGAATAA
 
Protein sequence
MSSKQLKTLC VMALGLALAP AAWAQDTPAA PAADAPAAQA PAEGAAAPQG LSMGQEDPAD 
GIGSTYVAAT HGDWEQRCVR TEDGADPCQM YQLLKDGEGN SVAEISMFAL PAGQQAAAGA
TIVAPLETLL TANLTMGVDA AKPKVYPFSW CNRAGCFARV GFTQAEVDAF KKGNKSVVTI
VPAVAPDQKV ALNVSLKGFT AAYDAVKASN EKAEAAQKPA AE