| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1381 |
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| Symbol | |
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| ID | 4897427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | + |
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| Start bp | 1435837 |
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| End bp | 1437489 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640111968 |
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| Product | putative alpha-isopropylmalate/homocitrate synthase family transferase |
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| Protein accession | YP_001043263 |
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| Protein GI | 126462149 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00977] 2-isopropylmalate synthase/homocitrate synthase family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000314343 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.935869 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGGGGC AAGGGGCGGC GTCGGGGTCG GGGAAGGAGC GGCTCTGGAT CTATGACACG
ACGCTGCGCG ACGGGCAGCA GACGCAGGGC GTGCAATTCT CGACGCCCGA GAAGCGGCAG
ATCGCCGAGG CGCTCGACCG GCTCGGGGTG GATTACATCG AGGGCGGCTG GCCGGGGGCC
AATCCGACCG ACTCGGAGTT CTTCGCGGCC CTGCCCGCCG TCCGGGCGCG GGTGGCGGCC
TTCGGCATGA CGAAGCGCGC GGGCCGCTCG GCCGAGAATG ACGATGTGCT GGCCGCCGTG
CTCGACGCGG GCACGGACAC GGTCTGCCTT GTCGGCAAGA CGCACGAATT CCATGTGACG
ACGGCGCTCG GCGTGACGCT CGAGGAGAAT CTCGAGGCGA TCCGCGCCTC GGTGGCGCAT
GTCGTGGCCA GGGGGCGCGA GGCGATCCTC GATGCCGAAC ATTTCTTCGA CGGCTACCGG
GCCAATCCCG CCTATGCGCT GGGTTGCCTG CAGGCGGCGC TCGGGGCGGG GGCGCGCTGG
GTGGTGCTCT GCGACACGAA CGGCGGCACG CTGCCCGCCG AGGTGGGGCG CATCGTGGCC
GAGGTCATCG CCGCGGGCGT GCCCGGCGAC CGGCTGGGGA TCCACACCCA TGACGACACG
GGCACCGCGG TGGCGGCCAC GCTCGCGGCC GTCGATGCCG GGGCGCGGCA GGTGCAGGGC
ACGCTGAACG GCTTGGGCGA GCGCTGCGGC AACGCGAACC TCACCACGCT CATCCCCACC
TTCCTGCTGA AGGAGCCCTA TGCCAGCCGC TTCGAGACCG GGATCGACCG CGAGGCCCTG
AGCGGCATGG TGCGGGTGAG CCGTATGCTC GACGACATCC TGAACCGGGT GCCGCGCCGG
GCCTCGGCCT ATGTCGGCGC CTCGGCCTTC GCGCACAAGG CGGGGCTCCA TGCCTCGGCG
ATCCTGAAGG ATCCCGCCAC CTACGAACAT GTCGATCCCG CGCTGGTGGG CAACGTGCGG
GTGATCCCCA TGTCGAACCA GGCCGGCCAG TCGAACCTGC GGGCGCGGCT GGCCGAGGCG
GGGCTCGAGG TGCCTTCGGG CGATCCGCGG CTGGGCCGGA TCCTCGAGAC GGTCAAGGCG
CGCGAGGATC AGGGCTATGC CTACGATTCC GCGCAGGCGA GCTTCGAGCT GGTGGCGCGG
CGCGAGCTGG GCCTCCTGCC CAGCTTCTTC GAGGTGAAGC GCTACCGCGT GACCGTCGAG
CGGCGGCGGG TGGGCGAGGG CACCATGACG CTCTCGGAAG CGGTGGTCGT GGTGCTGATC
GACGGGCAAC GCGTGCTGTC GGTTTCGGAA AGCCTCGACG AGAACGGCAC CGAGCGCGGC
CCGGTGAACG CGCTGTCGAA GGCGCTGGCC AAGGATCTCG GCCGCTGGCA GTCGGTGATC
GACGACATGC GGCTGGTGGA TTTCAAGGTG CGGATCACGC AGGGCGGCAC CGAGGCCGCG
ACCCGCGTCA TCATCGACAG CGAGGACGGG CAGGGCCGGC GCTGGTCGAC GGTGGGGGTT
TCGCCCAACA TCGTCGATGC CTCGTTCGAG GCGCTCCTTG ATGCGATCAA CTGGAAGCTC
GTGCGCGACG CACGGCAGGA GGACAGCCGA TGA
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| Protein sequence | MAGQGAASGS GKERLWIYDT TLRDGQQTQG VQFSTPEKRQ IAEALDRLGV DYIEGGWPGA
NPTDSEFFAA LPAVRARVAA FGMTKRAGRS AENDDVLAAV LDAGTDTVCL VGKTHEFHVT
TALGVTLEEN LEAIRASVAH VVARGREAIL DAEHFFDGYR ANPAYALGCL QAALGAGARW
VVLCDTNGGT LPAEVGRIVA EVIAAGVPGD RLGIHTHDDT GTAVAATLAA VDAGARQVQG
TLNGLGERCG NANLTTLIPT FLLKEPYASR FETGIDREAL SGMVRVSRML DDILNRVPRR
ASAYVGASAF AHKAGLHASA ILKDPATYEH VDPALVGNVR VIPMSNQAGQ SNLRARLAEA
GLEVPSGDPR LGRILETVKA REDQGYAYDS AQASFELVAR RELGLLPSFF EVKRYRVTVE
RRRVGEGTMT LSEAVVVVLI DGQRVLSVSE SLDENGTERG PVNALSKALA KDLGRWQSVI
DDMRLVDFKV RITQGGTEAA TRVIIDSEDG QGRRWSTVGV SPNIVDASFE ALLDAINWKL
VRDARQEDSR
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