Gene Rsph17029_1335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1335 
Symbol 
ID4896717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp1384612 
End bp1385364 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content69% 
IMG OID640111922 
ProductMgtC/SapB transporter 
Protein accessionYP_001043217 
Protein GI126462103 
COG category[S] Function unknown 
COG ID[COG1285] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.295436 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGAAT TGCTTCAGGA CTTTCTCAGG CAAGACATCG CCCTGCCCAT GATCAGCAGC 
CTCGTGACGG GGTTCCTGAT CGGGCTCGAC CGCGAGATCC GTGGTAAGCC TGCGGGCCTG
CGGACCCATG CGCTCGTCTG TTTCGCAGCG ACGATCCTGA CCCTCGCCGC GGCCCGGCAG
GGGCAGTGGA CCGTCGTCCT TCTTCCCGAC ACGCAGATCG TCGCCGACCC CGCGCGCATG
GCCCATGGGA TCCTGACGGG CATCGGCTTT CTCGGCGCGG GCGTGATCTT CCGGGAGGGG
GCGTCGGTCC ATGGGCTGAC CACGGCGGCC TCGCTCTGGA TCACTTCTGC CCTGGGGATC
GTCTATGGGA TCGGCATGTA CTGGCTGGCC CTTGCCGGAA CGGCGGTCAC GCTCATCCTC
CTCGTGGCGG TGCGGCTCAT CCATGCGCGG CTTCCGGTGC GCACGGAGAT CCGGCTGCGC
GTGACGCTGC GGCTCGGGTC CAGCTTCGAC GCCGAGCGGT TGACCGCGCT CCTGCACAGC
AACGGGGTGG AGATCGGCGC CATCAGCCGC AGCCTGAGCC GGCCTTCCGA GCGGATGCGG
CTCAGCACCG CCGTCCATGT CCGGCAGGAG GCCACGCTCG ACCGGCTCGC CCGGGCGCTC
ACCGAAGAGC CGGATGTGCT GGCCTTCGAC CTGATGCCCG TCGGCGATCC AGCCGGGCGC
ACCCTGTTGG ACCGGACCGG CGACGCATCG TGA
 
Protein sequence
MAELLQDFLR QDIALPMISS LVTGFLIGLD REIRGKPAGL RTHALVCFAA TILTLAAARQ 
GQWTVVLLPD TQIVADPARM AHGILTGIGF LGAGVIFREG ASVHGLTTAA SLWITSALGI
VYGIGMYWLA LAGTAVTLIL LVAVRLIHAR LPVRTEIRLR VTLRLGSSFD AERLTALLHS
NGVEIGAISR SLSRPSERMR LSTAVHVRQE ATLDRLARAL TEEPDVLAFD LMPVGDPAGR
TLLDRTGDAS