Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_1324 |
Symbol | |
ID | 4896697 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 1371390 |
End bp | 1372262 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640111911 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001043206 |
Protein GI | 126462092 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGAAGA GCTGGAACAA CCGCGCCTGG TTCCTCGTGC TGCCGGTGCT GGCGCTCGTG GCCTTCTCGG CCGTCGTGCC GCTGATGACA GTTGTCAACT ATTCGGTGCA GGACACGTTC GGGAATAACG AGTTCTTCTG GGCCGGCCTC GAATGGTTCG AGGAGACCGT CACCTCCGAG CGCATCCATG CCGCCCTCGG GCGTCAGGTG CTCTTCACCG CGATCATCCT TGCCATCGAG GTGCCGCTCG GGATCTTCGT GGCGCTCCAT ATGCCGAAGA AGGGCTTCTG GGCCAGCCTC TGCCTGATCC TGATGGCGAT GCCGCTTCTG ATCCCCTTCA ACGTGGTGGG CACGATCTGG CAGATCTTCG GCCGGGTGGA CATCGGCCTT CTGGGCCGCA CGCTGACTGC GCTCGGGGTC GACTACAATT ACACGAACGA CTGGCTCGAT GCCTGGGTCA CGGTCATCGT GATGGATGTC TGGCACTGGA CCTCGCTGGT GGCGCTCCTC TGCTACGCCG GGCTGCAATC CATCCCCGAG GCCTACTATC AGGCAGCCAA GATCGATCAG GCCAGCCGCT GGGCCGTGTT CCGCTACATC GAGCTGCCGA AGATGCGGGG CGTGCTGCTG ATCGCGGTGC TGCTGCGCTT CATGGACAGT TTCATGATCT ATACCGAGCC CTTCGTGGTG ACGGGCGGCG GCCCCGGCAA CTCGACCACC TTCCTCTCGA TCGATCTCGT GAAGATGGCC ATCGGCCAGT TCGACCTCGG CCCCGCCGCC GCCTTCTCGA TCATCTACTT CCTCGTCATC CTGCTGATCT CGTGGGTGTT CTACACCGTG ATGACCAACC TCGACCGGGA GGACCGCCCG TGA
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Protein sequence | MEKSWNNRAW FLVLPVLALV AFSAVVPLMT VVNYSVQDTF GNNEFFWAGL EWFEETVTSE RIHAALGRQV LFTAIILAIE VPLGIFVALH MPKKGFWASL CLILMAMPLL IPFNVVGTIW QIFGRVDIGL LGRTLTALGV DYNYTNDWLD AWVTVIVMDV WHWTSLVALL CYAGLQSIPE AYYQAAKIDQ ASRWAVFRYI ELPKMRGVLL IAVLLRFMDS FMIYTEPFVV TGGGPGNSTT FLSIDLVKMA IGQFDLGPAA AFSIIYFLVI LLISWVFYTV MTNLDREDRP
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