| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1321 |
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| Symbol | |
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| ID | 4896664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | - |
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| Start bp | 1368489 |
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| End bp | 1370213 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640111908 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001043203 |
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| Protein GI | 126462089 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00160153 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATACC GTACGACAGC CACCGCGATG GCCCTGTGCC TGATGGCCGT GGCCGCGCCC
GCCTGGGCCG ACATGGAGGC CGCGAAGAAG TTTCTCGATG CCGAGATCGG GGATCTCTCC
TCGCTCTCGC GCGCCGAGCA GGAAGCCGAG ATGCAATGGT TCATCGACGC GGCCCAGCCC
TTCGCCGGGA TGGAGATCAA GGTCGTCTCC GAGACCATCA CCACCCACGA ATATGAGAGC
AAGGTCCTCG CCCCCGCCTT CTCCGCCATC ACCGGGATCA AGATCAGCCA CGACCTGATC
GGCGAGGGCG ACGTGGTCGA GAAGCTGCAG ACCCAGATGC AGTCGGGCGA GAACATCTAC
GACGCCTATA TCAACGACAG CGACCTGATC GGCACCCACT GGCGCTACAA GCAGGCGCGC
AGCCTCACCG ACTGGATGGC CAATGCGGGC AAGGACGTCA CCAACCCCGG CCTCGACCTG
CAGGATTACA TCGGGCTGAA ATTCACCACC GCCCCCGACG GCGAGCTCTA CCAGCTGCCC
GACCAGCAGT TCGCCAACCT CTACTGGTTC CGCGCCGACT GGTTCGACGA TGCCGACACC
AAGGCCGCGT TCAAGGAGAA GTACGGCTAC GAGCTGGGCG TGCCGCTGAA CTGGTCGGCC
TATGAGGACA TCGCCGAATT CTTCACCGGC CGCGACATGA GCGCGCTCGG CGGGCCGAAG
AGCGCCTTCG GCAGCATGGA TTACGGCAAG AAGGACCCGA GCCTCGGCTG GCGCTACACC
GACGCCTGGA TGTCGATGGC GGGCATGGGC GACAAGGGCG ATCCGAACGG GCTGCCCGTG
GACGAATGGG GCATCCGGGT GGACGAGAAC TCGCGTCCCG TGGGCTCCTG CGTGGCGCGC
GGCGGGGCCA CCAACGATGC GGCCGCGGTC TATGCAATCA CCAAATCGAT CGAATGGCTG
CAGAAATACG CCCCGCCGCA GGCGGCCGGC ATGACCTTCT CGGAATCGGG CCCGGTGCCG
GCGCAGGGCG AGGTGGCCCA GCAGATATTC TGGTACACCG CTTTCACCGC CGACATGGTC
AAGGAGGGCC TGCCGGTGAT GAACGAGGAC GGCACGCCCA AGTGGCGCAT GGCCCCCTCG
CCGCACGGCG CCTACTGGTC GGAGGGCACC AAGGTCGGCT ACCAGGACGT GGGTTCCTGG
ACGCTGCTGA AATCCACCCC CGACGAGCGG GCCAAGGCCG CCTGGCTCTA TGCGCAGTTC
GTCTCCTCGA AGACGGTCGA CGTGAAGAAG AGCCATGTGG GCCTGACCTT CGTGCGCGAA
TCTACCATCC AGCACCAGAG CTTCACCGAC CGTGCGCCGA AGCTCGGCGG ACTCGTGGAA
TTCTACCGCT CGCCCGCCCG GGTGCAGTGG TCGCCCACGG GCACGAACGT GCCGGACTAT
CCCAAGCTCG CCCAGCTCTG GTGGCAGAAC ATCGGCGACG CCATGTCGGG CGCCAAGTCG
CCGCAGGAGG CGCTCGACGC GCTCTGCGCC GAGCAGGAGA AGGTGATGGC CCGGCTCGAG
CGCGCGGGCG TGCAGGGCGA TCTCGGCCCG AAGCTGAACG AGGAGAAGGA CCCGCAGGAA
TGGCTCGACG CCCCCGGAGC CCCGGTGGCC AAGCTCGAGA ACGAGAAGCC ACAGGGCGAG
ACCATCTCCT ATGACGAGCT CATCAAGTCC TGGCAGAAGG GCTGA
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| Protein sequence | MRYRTTATAM ALCLMAVAAP AWADMEAAKK FLDAEIGDLS SLSRAEQEAE MQWFIDAAQP
FAGMEIKVVS ETITTHEYES KVLAPAFSAI TGIKISHDLI GEGDVVEKLQ TQMQSGENIY
DAYINDSDLI GTHWRYKQAR SLTDWMANAG KDVTNPGLDL QDYIGLKFTT APDGELYQLP
DQQFANLYWF RADWFDDADT KAAFKEKYGY ELGVPLNWSA YEDIAEFFTG RDMSALGGPK
SAFGSMDYGK KDPSLGWRYT DAWMSMAGMG DKGDPNGLPV DEWGIRVDEN SRPVGSCVAR
GGATNDAAAV YAITKSIEWL QKYAPPQAAG MTFSESGPVP AQGEVAQQIF WYTAFTADMV
KEGLPVMNED GTPKWRMAPS PHGAYWSEGT KVGYQDVGSW TLLKSTPDER AKAAWLYAQF
VSSKTVDVKK SHVGLTFVRE STIQHQSFTD RAPKLGGLVE FYRSPARVQW SPTGTNVPDY
PKLAQLWWQN IGDAMSGAKS PQEALDALCA EQEKVMARLE RAGVQGDLGP KLNEEKDPQE
WLDAPGAPVA KLENEKPQGE TISYDELIKS WQKG
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