Gene Rsph17029_1244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1244 
Symbol 
ID4896137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp1291519 
End bp1292247 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content74% 
IMG OID640111830 
ProductABC transporter related 
Protein accessionYP_001043126 
Protein GI126462012 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.184068 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.743108 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCAG CCGCCCCGCC CGCGCTCGAG ATCGCCGGAC TGAGCCACAG CTTCGGCGCG 
GTCCGGGCCC TTCGGGAGGT GAGCTTCACC GTCCCGCGGG GCGCCTTCGT GGCCCTTCTC
GGCGTGAACG GGGCGGGCAA GACCACGCTC TTCTCGCTGG TGACCCGGCT TTACGATTCC
ACGAGCGGGA CGATCCGCGT GGCGGGCTTC GATGCCCGCC GCCAGCCGGG CGAGGCGCTC
GCCCGGCTGG GCGTCGTCTT CCAGAGCCGG GCGCTGGACG GAGACCTGAC GCTGACGCAG
AACCTGCGCT ATCACGCGGC GCTGCACGGG ATCGGCCGGC GCGAGGCCGC GCCCCGCATC
GCCGAGGTGC TGACGCTGGT CAGCCTGACC GACAAGGCCC ATGCGCGGGT GGCGACCCTC
TCGGGCGGCC AGCAGCGCCG GGCCGAGATC GCGCGCGCGC TCCTGCACCG GCCCGAGCTT
CTGCTCCTCG ACGAGGCCAC GGCGGGGCTC GACCTGCGCG CCCGCGACGA GGTGCGCCGG
GTGGTGCGCG ACCTGATCGC CACGGAAGGC GTCTCCGCCC TCTGGGCCAC GCACATGATG
GAGGAGATCG CGCCCGAGGA TCGGGTGGTG GTGCTCCACC GGGGCGAGGT GCGGCTTGCC
GGTCGCGCCG CGGAGCTGGG CGGCAGCCTC GCGCAGGGGT TCCTCGCGCT GACGGAAGAG
ACCGCATGA
 
Protein sequence
MTAAAPPALE IAGLSHSFGA VRALREVSFT VPRGAFVALL GVNGAGKTTL FSLVTRLYDS 
TSGTIRVAGF DARRQPGEAL ARLGVVFQSR ALDGDLTLTQ NLRYHAALHG IGRREAAPRI
AEVLTLVSLT DKAHARVATL SGGQQRRAEI ARALLHRPEL LLLDEATAGL DLRARDEVRR
VVRDLIATEG VSALWATHMM EEIAPEDRVV VLHRGEVRLA GRAAELGGSL AQGFLALTEE
TA