Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_1228 |
Symbol | |
ID | 4896071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 1277330 |
End bp | 1277899 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640111814 |
Product | PfpI family intracellular peptidase |
Protein accession | YP_001043110 |
Protein GI | 126461996 |
COG category | [R] General function prediction only |
COG ID | [COG0693] Putative intracellular protease/amidase |
TIGRFAM ID | [TIGR01382] intracellular protease, PfpI family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACTCG ACGGAAAAAC CATCGCGATC CTGATCGCGC CCCGCGGCAC CGAAGACGTG GAATATGTGC GGCCGAAGGA AGCGCTGACC CAGGCGGGGG CGACGGTCGT GACCGTCAGC CTCGAGCCGG GTGAGGCGCA GACGGTGAAC GGCGATCTCG ATCCCCGCGC GACGCACCGG GTCGACCGCA CCTTCGCCGA TGTCTCGGCA GACGGGTTCG ACGGGCTCGT AATCCCCGGC GGCACGGTGG GTGCCGACAA GATCCGCGCG AGCGAAGAGG CCGTGGCCTT CGTGCGCGGC TTTGTCAGTG CGGGCAAGCC GGTGGCCGCA ATCTGCCACG GACCCTGGGC GCTGGTCGAG GCGGACGTGC TCAAGGGGCG CGAAGTAACC TCCTACCCCT CGCTCGCCAC CGACATCCGC AATGCGGGGG GCCGCTGGGT CGACCGCGAG GTCGTCGTCG ATTCGGGGCT CGTCACCAGC CGCAAGCCGG ACGATCTCGA TGCCTTCTGC GCCAAGATGA TCGAGGAATT TGCCGAAGGC GTGCACGACG GCCAGCGCCG CAGCGCCTGA
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Protein sequence | MTLDGKTIAI LIAPRGTEDV EYVRPKEALT QAGATVVTVS LEPGEAQTVN GDLDPRATHR VDRTFADVSA DGFDGLVIPG GTVGADKIRA SEEAVAFVRG FVSAGKPVAA ICHGPWALVE ADVLKGREVT SYPSLATDIR NAGGRWVDRE VVVDSGLVTS RKPDDLDAFC AKMIEEFAEG VHDGQRRSA
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