| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1112 |
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| Symbol | |
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| ID | 4895153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | + |
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| Start bp | 1153098 |
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| End bp | 1155164 |
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| Gene Length | 2067 bp |
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| Protein Length | 688 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640111698 |
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| Product | glycogen debranching enzyme GlgX |
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| Protein accession | YP_001042994 |
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| Protein GI | 126461880 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.758297 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.439261 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTTTG CGCTGCGCGA GGGGAGGCCC TTCCCGCTCG GGGCGACCTG GGACGGGTCG
GGCACCAACT TCGCCATCTT CTCGGCCCAT GCGCGCAAGG TCGAGCTCTG CCTCTTCGAT
GCCCGCGGGC GGCGCGAGAT CGCCCGCGTG GCCCTGCCGG AATATACCCA CGAGGTCTGG
CACGGCTATC TGCCCGAGGT GCGCCCCGGG CAGCTCTACG GCTACCGCGT CCACGGACCC
TACGAGCCGC AGGCCGGGCT CCGCTTCAAT CCGAACAAGC TTCTGATCGA CCCCTATGCG
CTGATGCTGC AGGGCGAGGT GGTCTGGCAC GATGCGGTCT TCGGCTACCG GATGGGCAAT
GCCCGCGCCG ACCTCTCGTT CGACCGCCGG GACTCGGCCT TCGTGATGCC GAAATGCGTG
GTCGTCGATC CCGCGGTGAC CTGGGGGCCT GACTATCCGC CGAACATCCC CTGGGCCGAG
ACGATCATCT ACGAGGCCCA TGTCAAGGGC ATGACCGCCC TGAATGCCGC CATCCCCGAC
CGGGTGCGCG GCTCCTTCGC GGCGCTGGCC GACCCGCGGG CCATCGAGCA TCTGGTGACG
CTCGGCGTGA CCGCCATCGA GCTCATGCCC ACGCAGGCCT TCTTCGACGA CCGCTACCTG
ATCGAGAAGG GGCTCACGAA CTACTGGGGC TACAATACGA TCGGCTTCTT CGCGCCGGCC
ACCCGCTACA TCTCGCCCGG CGGCGGGGTG CATGAATTCA AGCTGATGGT GCGCCGGCTG
CACGAGGCCG GCATCGAGGT GATCCTCGAC GTGGTCTACA ACCACACGGC CGAGGGCAAC
CACCTCGGGC CCACGCTCTC GTTCAAGGGG ATCGACAATG CCAGCTACTA CATGCTGGGC
GACGATCCGC GCTACTACTA CGACACGACG GGCTGCGGAA ACACGGTGAA CCTCGGGCAC
CAGCGGGTGC TGCAGATGGT CATGGACAGT TTGCGCTACT GGGTCGAGGC CTGCCATGTC
GACGGCTTCC GCTTCGATCT GGCAACCTCG CTCGGGCGCG ACCGGCAGGG GTTCAACGCG
AATGCGGTCT TTCTCGACGC GGTGCGGCAG GATCCGGTCC TGAGCCGGGT GAAGCTGATC
GCCGAGCCCT GGGACACGGG CCACGAAGGC TATCAACTGG GCAATTTCCC TCCCGGATGG
GCCGAGTGGA ACGATCAGTA TCGCGACACG GTGCGCTCCT ACTGGAAGGG CGATGCGGGC
GAGCTGCCAG GGCTCGCCTC GCAGCTTCTG GGATCGGCCG GCCATTTCGA CCGCCGGGGG
CGGCGTCCCT GGGCCAGCGT GAATTTCATC ACCGCGCACG ACGGGTTCAC CCTCGCCGAC
ACCGTGTCCT ACAACGACAA GCACAATGCG GCGAACGAGG AAGGAAACCG CGACGGCCAT
TCCGACAACC GCAGCTGGAA CTGCGGCGAG GAGGGGCCCA CCGAGGATGC GGAGGTGCTC
GACCTCCGCG ACCGGATGCG GCGGGCGATG ATGGGCACGC TCCTGATCTC GCAGGGCACG
CCGATGATTC TGATGGGAGA CGAGGTGGGC CGCAGTCAGG GCGGCAACAA CAACGCCTAC
TGTCAGGACA ATGCGATGAA CTGGCTGAAA CTCGAAGGGC TCGAGCCGCG GGACGCGGCC
TTCCTCGACT TCACCCGCAG GCTGATCGCG CTGCGCAGGT CGCGCCCGCT GCTGCGGCAT
CCCTCGTTCC TGCACAAGGC GGCGGTGGGA GAAGAGCCGG TCGAAGTGCG CTGGCTGCGC
CCCGACGGGG AAGAGATGGA GCCCGACGAC TGGCACAATC CGGCGGCGCG AACTTTGGGC
CTGCTGATCC GGAACAAGCC GGCCCTGCTG GCACTTTTCA ATAGCCATTT CGAGGAGGTG
CCCTTCTCCC TGCCGCTGCG CGGCCGGGGA TGGGGGCTGC TTCTGGACAC GGCTGCGGGG
CGGGTGCCGG AGCGGCCCGT GCCGCAGCGG GCGGCGGACT TCGTTGTGCC GCCGCGGACA
CTTCTGGTTC TGGAGGAGAC CGAATGA
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| Protein sequence | MSFALREGRP FPLGATWDGS GTNFAIFSAH ARKVELCLFD ARGRREIARV ALPEYTHEVW
HGYLPEVRPG QLYGYRVHGP YEPQAGLRFN PNKLLIDPYA LMLQGEVVWH DAVFGYRMGN
ARADLSFDRR DSAFVMPKCV VVDPAVTWGP DYPPNIPWAE TIIYEAHVKG MTALNAAIPD
RVRGSFAALA DPRAIEHLVT LGVTAIELMP TQAFFDDRYL IEKGLTNYWG YNTIGFFAPA
TRYISPGGGV HEFKLMVRRL HEAGIEVILD VVYNHTAEGN HLGPTLSFKG IDNASYYMLG
DDPRYYYDTT GCGNTVNLGH QRVLQMVMDS LRYWVEACHV DGFRFDLATS LGRDRQGFNA
NAVFLDAVRQ DPVLSRVKLI AEPWDTGHEG YQLGNFPPGW AEWNDQYRDT VRSYWKGDAG
ELPGLASQLL GSAGHFDRRG RRPWASVNFI TAHDGFTLAD TVSYNDKHNA ANEEGNRDGH
SDNRSWNCGE EGPTEDAEVL DLRDRMRRAM MGTLLISQGT PMILMGDEVG RSQGGNNNAY
CQDNAMNWLK LEGLEPRDAA FLDFTRRLIA LRRSRPLLRH PSFLHKAAVG EEPVEVRWLR
PDGEEMEPDD WHNPAARTLG LLIRNKPALL ALFNSHFEEV PFSLPLRGRG WGLLLDTAAG
RVPERPVPQR AADFVVPPRT LLVLEETE
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