| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1110 |
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| Symbol | |
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| ID | 4895155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | + |
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| Start bp | 1147610 |
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| End bp | 1150918 |
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| Gene Length | 3309 bp |
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| Protein Length | 1102 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640111696 |
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| Product | trehalose synthase |
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| Protein accession | YP_001042992 |
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| Protein GI | 126461878 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases
[COG3281] Uncharacterized protein, probably involved in trehalose biosynthesis |
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| TIGRFAM ID | [TIGR02456] trehalose synthase
[TIGR02457] trehalose synthase-fused probable maltokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.531245 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAGA ACGTCTCTCC CTCCACCGTT GCCGTCCGCC GCACGGACGG CATCGATCGC
AGCCAGACCG ACTGGTACAA GGACGCGATC ATCTATCAGC TGCACATCAA GGCGTTCCAG
GACGCCAATG GCGACGGGAT CGGTGACTTC GCGGGCCTGA TGCAGCGGCT GGATTATGTG
CAGGCGCTGG GCGTGACCGC GATCTGGCTG CTGCCTTTCT ATCCCTCGCC GCTCCGCGAC
GACGGCTACG ACATCTCGGA CTATCGCTCG ATCAACCCGT CCTACGGCGC GATGCGCGAC
TTCAAGCTGT TCGTGCAGGA GGCGCACAAG CGCGGGCTGC GCGTCATCAC CGAGCTCGTC
ATCAACCACA CCTCCGACCA GCATCCCTGG TTCCAGCGGG CCCGGCGGGC GAAGAAGGGA
TCGGCCGCGC GCGACTGGTA TGTCTGGAGC GATACCGACC AGAAATTCCC CGAAACGCGG
ATCATCTTCC TCGATACGGA AAAGTCGAAC TGGACCTGGG ATCCGGTGGC AGGCGCCTAT
TACTGGCACC GCTTCTATTC GCACCAGCCC GACCTGAACT TCGACAATCC CCGTGTGCTC
GAGGAAGTGC TCAAGATCAT GCGCATGTGG CTCGAGATGG GCGTCGACGG GCTCCGGCTC
GACGCGATCC CCTATCTGGT CGAGCGCGAG GGCACCAACA ACGAGAACCT CCCCGAGACG
CACGATGTTC TCAAGAAGAT CCGGGCCAAC CTCGACCAGC ATTTCCCCGA CAGGATGCTG
CTCGCCGAGG CGAACCAGTG GCCGGAGGAC ACGCGCCCCT ATTTCGGCGA GGGCGACGAA
TGCCACATGG GCTTCCATTT CCCGCTGATG CCGCGGATGT ACATGGCGCT GGCACAGGCA
GACCGGCATC CGATCACCGA CATCATCCGC CAGACGCCCG AGATCCCGGA AGGCTGCCAA
TGGGGCATCT TCCTCCGGAA CCACGACGAG CTGACGCTCG AGATGGTGAC GGCCGAAGAG
CGCGATTACA TGTGGCGCTT CTATGCCGAG GATTCTCGGG CGCGGATCAA TCTCGGCATC
CGGCGCAGGC TGGCGCCGCT GATGAAGAAC GACCGGCGCA AGATCGAGCT TCTGAACCAG
ATGCTGATGT CGATGCCCGG CACGCCCATC GTCTATTACG GCGACGAGAT TGGCATGGGC
GACAACTATT ATCTCGGCGA CCGGGATGGT GTGCGGACGC CCATGCAATG GTCGGCCGAC
CGCAACGGCG GCTTCTCGCG CTGCAATCCG CAGCAGCTCT ACCTGCCGAC CATCCTCGAT
CCGGTCTATG GCCATCAGGC GATCAACGTC GAGGCGCAGG CGGCGGACCC GTCGTCGCTG
CTGAACTGGA CGCGCCGCCT GATCGCGGTG CGCAAACAGC ATCCGGCCTT CGGGCGCGGC
TCGATGAGCC TGCTCTATCC GCGCAACCGC AAGGTGCTGG CCTATGTCCG CAGCCACGAG
GGCACAGACA TCCTCTGCGT GGCGAACCTC TCGGACACGG CGCAGGCGGT CGAGCTGGAT
CTCGCCCGGT TCCGCGGCGC GGTGCCGGTC GAGCTTACGG GCCGGTCGGA GTTTCCGCCG
GTGGGCGATC TGCCCTACAT GCTGACGCTG CCGCCCTACG GCTTCTACTG GTTCATCCTC
TCCGACCAGC AGGCGCTGCC GAGCTGGCAC CAGCCGATGC CCGAGACGCT GCCGGATTTC
ATCACGCTCA CGACGCGCGA CGGGCGGGCC GAGACGGCGC TCACCGGGCG CGAGACGCGC
CAGCTCGAGG CCGACGTGCT GCCGAACTGG CTGCCGCTGC AACGCTGGTT CGGCGCCAAG
GAAGAAAAGA TCAGCGCCGT GAAGCTGGCC GTTCTGGGCT CGCTGTCGGC CGATCATGCC
CTCGTCCGGC TCGAGGCCGA TGTGGGCGGC GAGGTGCAGC AGTATTTCCT GCCCGCCTCC
GCGCTCTGGG GCGAGGAGCA GCTCCGGGCC GGGGCGCCCA AGCTGAGCTT CACGCTGGCC
AAGGTCCGGC GCGGGCCGCA GGTGGGCGCG CTCATCGACG GGGCCTATGA CGAGCAGATG
GCGCAGGACA TGCTCGAGGC GCTGCGCGAC AGTCGCAAAC TGTCGGGTGC CGGGGGCGAG
GTGGTGTTCG AGCCGGGCTC GGGACTGGCC GAGATCGCCG ACCCGGGCGA GCCGCGCTAT
CTCGGGGCCG AGCAGTCGAA CATCTCGATC GCCTTCGGCG ACCGCATGAT CCTGAAGCTC
TACCGCCGCT TGCGGGCGGG CGAGCAGCCG GACGTCGAGG TGGCGCGCTT CCTGACGGAA
GTGGCGGGCT ACACCCATAC GCCCCGCTAT CTCGGCGTCG TGAGCCTGCG TCCGGCGGAG
GGCGAGGCGA CCGTCCTCGC CGCGGCCTTC GCCTTCGTGG CCAACATGGG CGACGCCTGG
CGCGGCCTCT TCGACGCGCT GGTGCGGGAT CTGGGCGAGT TCGGCGGCTG GAGCACGGCC
GAGGCGCCGG AAGTGGAGAA GGACGGCTTC TCCTTCCCGC TCACCATTCC GGGCCTTCTC
GGCCAGCGCA CGGCCGAGCT GCATCAGGCC TTCGCCACCG AGACGGACGA GGCGGCCTTC
CGGATGGAGC CGCTCACGGC CCAGCATCTG ACCGGCTGGG CCGAGGGGGC GCGGCGCGAG
GCCGAGGCCA TGCTGTCGGT GCTCGAACGG CAGCGGACGC ACCTGCCCGA CGAGGTGCTG
CCCCTGGCCG AGGCGCTGCT CGCGCGGCGC GACGACCTGC TGGCGCGGCT CGACCGCGTC
ACCGGCTTCG AACCCTCGGG CGCGCTGACC CGCATCCATG GCGACTACCA TCTGGGGCAG
GTGCTGCTTG CGCAGGACGA TGTCGCCATC ATCGACTTCG AGGGCGAACC GCGCCGCACG
CTTGCAGAGC GCCGCGAGAA GTCCTCGCCG CTCCGCGACG TGGCGGGGAT GCTGCGCTCG
TTTGACTATG CCGCCGCCGC CGCCCTCGCA CGTCACGAGG AGAGCTTCGG CCCGGCGAGC
GAGCGGGCGG TGGAGCGGGC CGAGGCCTGG CGGCAACAGG CGGTGGCCGA TTTCCTTGCC
GCTTACGAGG GCGCGTCCGC GGGCACCGCG AGCCTGCCCT CCGACCCGGC GCTGAAGGAG
GCGCTGCTCG ATCTCTTCCT CGTGCAGAAG GCGGTCTACG AGACCTCCTA CGAATTGGGC
AGCCGTCCCG CCTGGGTCGG CATCCCGCTG CGCGGGCTTC TGGAACTGCT GGACAGGAAA
CCTGCATGA
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| Protein sequence | MNQNVSPSTV AVRRTDGIDR SQTDWYKDAI IYQLHIKAFQ DANGDGIGDF AGLMQRLDYV
QALGVTAIWL LPFYPSPLRD DGYDISDYRS INPSYGAMRD FKLFVQEAHK RGLRVITELV
INHTSDQHPW FQRARRAKKG SAARDWYVWS DTDQKFPETR IIFLDTEKSN WTWDPVAGAY
YWHRFYSHQP DLNFDNPRVL EEVLKIMRMW LEMGVDGLRL DAIPYLVERE GTNNENLPET
HDVLKKIRAN LDQHFPDRML LAEANQWPED TRPYFGEGDE CHMGFHFPLM PRMYMALAQA
DRHPITDIIR QTPEIPEGCQ WGIFLRNHDE LTLEMVTAEE RDYMWRFYAE DSRARINLGI
RRRLAPLMKN DRRKIELLNQ MLMSMPGTPI VYYGDEIGMG DNYYLGDRDG VRTPMQWSAD
RNGGFSRCNP QQLYLPTILD PVYGHQAINV EAQAADPSSL LNWTRRLIAV RKQHPAFGRG
SMSLLYPRNR KVLAYVRSHE GTDILCVANL SDTAQAVELD LARFRGAVPV ELTGRSEFPP
VGDLPYMLTL PPYGFYWFIL SDQQALPSWH QPMPETLPDF ITLTTRDGRA ETALTGRETR
QLEADVLPNW LPLQRWFGAK EEKISAVKLA VLGSLSADHA LVRLEADVGG EVQQYFLPAS
ALWGEEQLRA GAPKLSFTLA KVRRGPQVGA LIDGAYDEQM AQDMLEALRD SRKLSGAGGE
VVFEPGSGLA EIADPGEPRY LGAEQSNISI AFGDRMILKL YRRLRAGEQP DVEVARFLTE
VAGYTHTPRY LGVVSLRPAE GEATVLAAAF AFVANMGDAW RGLFDALVRD LGEFGGWSTA
EAPEVEKDGF SFPLTIPGLL GQRTAELHQA FATETDEAAF RMEPLTAQHL TGWAEGARRE
AEAMLSVLER QRTHLPDEVL PLAEALLARR DDLLARLDRV TGFEPSGALT RIHGDYHLGQ
VLLAQDDVAI IDFEGEPRRT LAERREKSSP LRDVAGMLRS FDYAAAAALA RHEESFGPAS
ERAVERAEAW RQQAVADFLA AYEGASAGTA SLPSDPALKE ALLDLFLVQK AVYETSYELG
SRPAWVGIPL RGLLELLDRK PA
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