Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_1015 |
Symbol | rimO |
ID | 4897455 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 1048915 |
End bp | 1050282 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640111601 |
Product | ribosomal protein S12 methylthiotransferase |
Protein accession | YP_001042898 |
Protein GI | 126461784 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGCGA TGGCCCAGAA CCCGCCCAAC CTCCGCCCCG ACCTCGCGCC GCGCCTGGTG ATCGACAGCC CCCGCCGCGA GGGGCAGCCG ACCATCGGCA TGGTCTCGCT CGGCTGCCCG AAGGCGCTCG TGGACAGCGA GCGGATCCTG ACGCGGCTGC GCGCCGAGGG CTATGCGATC TCGCCCGATT ATGCGGGGGC GGATGCGGTG ATCGTGAACA CCTGCGGCTT TCTCGACAGC GCCAAGGCCG AGAGCCTCGA GGCGATCGGC GAGGCGCTGC GCGAGAACGG GCGGGTGATC GTCACCGGCT GTCTCGGTGC CGAGCCCGAC TATGTCACGG GGGCGCATCC GAAGGTGCTG GCCGTGACCG GTCCGCATCA GTATGAGCAG GTGCTCGATG CGGTGCACGG GGCGGTGCCG CCCGCGCCCG ATCCGTTCGT GGATCTTCTG CCCGCGACGG GCGTGCGGCT CACGCCGCGC CATTTCAGCT ATCTGAAGAT CTCGGAAGGC TGCAACCACA CCTGCCGCTT CTGCATCATC CCCGACATGC GCGGCAGGCT CGCGAGCCGT CCCGAGCGGG CGGTGCTGCG CGAGGCGGAG AAGCTGGTCG AGGCCGGGGT GCGCGAACTG CTGGTCATCA GCCAGGATAC CAGCGCCTAC GGCACCGACT GGAAGGGGCC GGAGAAGTTT CCGATCCTGC CGCTCGCGCG GGAGCTGGGC CGGCTCGGCG CCTGGGTGCG GCTCCATTAT GTCTATCCCT ACCCCCATGT GCGCGAGCTG ATCCCGCTGA TGGCCGAGGG GCTGGTGCTG CCCTATCTCG ACATTCCGTT CCAGCATGCC CATCCCGAGG TGCTGAAGCG GATGGCGCGG CCGGCGGCGG CGGCCCGCAC GCTCGACGAG ATCGCCGCCT GGCGGCGCGA CTGTCCCGAG ATCACGCTGC GCTCGACCTT TATCGTGGGC TATCCCGGCG AGACCGAGGC GGAGTTCCAG ACCCTGCTCG ACTGGCTCGA CGAGGCGCAG CTCGATCGGG TGGGATGTTT CCAGTATGAG AATGTGGCCG GCGCGCGCTC GAACGCCCTG CCCGACCATG TGGCCCCCGA GGTGAAGCAG GAGCGCTGGG ACCGGTTCAT GGAGAAGGCA CAGGCCATCT CCGAGGCGAA GCTCGCGGCG AAGGTGGGCC GGCGGATCGA GGTGATCGTG GACGAGGTGG ACGAAGACGG CGCCACCTGC CGCACCAAGG CGGACGCACC GGAGATCGAC GGCAACCTCT TCATCGACGA GGGGTTCAAG GGCCTCGCTC CCGGCGACAT CCTGACGGTC GAGGTCGAGG AAGCCGGCGA GTATGATCTC TGGGGCCGTC CGGTCTGA
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Protein sequence | MGAMAQNPPN LRPDLAPRLV IDSPRREGQP TIGMVSLGCP KALVDSERIL TRLRAEGYAI SPDYAGADAV IVNTCGFLDS AKAESLEAIG EALRENGRVI VTGCLGAEPD YVTGAHPKVL AVTGPHQYEQ VLDAVHGAVP PAPDPFVDLL PATGVRLTPR HFSYLKISEG CNHTCRFCII PDMRGRLASR PERAVLREAE KLVEAGVREL LVISQDTSAY GTDWKGPEKF PILPLARELG RLGAWVRLHY VYPYPHVREL IPLMAEGLVL PYLDIPFQHA HPEVLKRMAR PAAAARTLDE IAAWRRDCPE ITLRSTFIVG YPGETEAEFQ TLLDWLDEAQ LDRVGCFQYE NVAGARSNAL PDHVAPEVKQ ERWDRFMEKA QAISEAKLAA KVGRRIEVIV DEVDEDGATC RTKADAPEID GNLFIDEGFK GLAPGDILTV EVEEAGEYDL WGRPV
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