| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1008 |
|---|
| Symbol | nadE |
|---|
| ID | 4896288 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | + |
|---|
| Start bp | 1043342 |
|---|
| End bp | 1045006 |
|---|
| Gene Length | 1665 bp |
|---|
| Protein Length | 554 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640111594 |
|---|
| Product | NAD synthetase |
|---|
| Protein accession | YP_001042891 |
|---|
| Protein GI | 126461777 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0171] NAD synthase
[COG0388] Predicted amidohydrolase |
|---|
| TIGRFAM ID | [TIGR00552] NAD+ synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.535669 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGAAC GCTTCCGCCT GACCCTCGCG CAGCTCAATC CGACGGTGGG CGATCTTGCC
GGAAACGCGG CACTGGCCCG CAGGGCGTGG GACGAGGCGC GCGCGGCCGG GTCGGACATG
CTGGCCCTGA CCGAGATGTT CGTGACGGGC TATCAGACGC AGGATCTGGT GATGCGGCGG
GCCTTCGTCG AGGAGGCGAT GGCCACGATC GAGCGGCTGG CCGCCGACTG CGCCGAGGGG
CCGGCCATCG GCATCGGCGG GCCCTGCCTC GAGGACGGGC GGCTGATGAA TGCCTATTGG
GTGCTGGAAG GTGGCCGGGT CAGCGCCCGC GTGTTCAAGC ACCATCTGCC CAACGCCGAA
GTGTTCGACG AGAAGCGCGT CTTTGCCTCG GGCGAGGTGC ACGGGCCCTG CCGGGTGGGG
CCGCTGCGCA TCGGCATTCC GATCTGCGAG GACAGCTGGC ACCCGGATGT CTGCGAGACG
CTGGCCGAGA CTGGGGCCGA GATCCTTCTG GTGCCGAACG GCTCGCCCTA TCACCGCGAG
AAGCTGGATG TGCGGGTGAA CCTGATGGTC ACGCGGGTGG TCGAGACCGG GCTGCCGCTC
GTCTATCTCA ACATGGTGGG CGGGCAAGAC GATCAGGTGT TCGACGGCGC CTCCTTCGTG
CTCAATCCGC ACGGGCGGCT GATGGCCCAG CTTCCGGCCT TCGAGGAGGC GCTCGTCCAT
GTCGATTTCG AGGCGACGGA CGAGGGCTGG CGCGCGCTGC CCGCGCCCAT CGTGGCCCAG
CCCGACCTCT GGGAGGCGGA CTATCATGCG ATGGTGCTGT CGCTGCGCGA TTATCTGGGC
AAGAGCGGCT TTTCGCGCGT GCTTCTGGGG CTGTCGGGCG GGATCGATTC CGCTCTGGTT
GCAGCCATCG CCGCCGATGC GCTGGGCCCC GAGGCCGTGC GCTGCGTGAT GCTGCCCTCG
CGCTTCACCT CGCAGGCCTC GCTCGAGGAT GCCGCGGCGG TGGCCCGCGC CCTCGGCTGC
CGTCTGGACG AAGTGGGGAT CGGGGGGCCG CAGGAGGCGG TGGGGGCGGC GCTCGGGCCG
CTCTTCGAAG GCACCGAGCC CGGCGTGACC GAGGAGAACA TCCAGAGCCG CCTGCGGGGC
CTTCTGCTCA TGGCGCTATC GAACAAGTTC GGCGAGATGC TCCTGACCAC CGGCAACAAG
TCCGAGGTGG CGGTGGGCTA CTGCACGATC TACGGCGACA TGAACGGGGG CTACAATCCG
ATCAAGGATC TCTACAAGAC CCGGGTGTTC CAGATGTGCC GCTGGCGCAA CGGCCACCAC
TGCCCCTGGA TGAAGGGGCC CGAGGGCGAG GTGATCCCGC CGCGGGTGAT CGACAAGCCG
CCCTCGGCCG AGCTGCGCGA GGACCAGAAG GATGAGGACA GCCTGCCGCC CTATGCCACG
CTCGACGCGA TCCTCGAAGG GCTCGTGGAC CGCGAGGAGA GTGTGGCCGA GCTGGTGGCG
CGGGGCTTCG AGCGCGAGAC GGTGGCGCGG ATCGAGCGGC TGATCCTCGG CAGCGAATGG
AAGCGCTTCC AGTCGGCGCC GGGGACGCGG CTCACGCGGC GGGCCTTCTG GCTCGACCGG
CGCTATCCGA TGGTGAACCG CTGGCGGGAT GCGGGCGGCG CCTGA
|
|---|
| Protein sequence | MTERFRLTLA QLNPTVGDLA GNAALARRAW DEARAAGSDM LALTEMFVTG YQTQDLVMRR
AFVEEAMATI ERLAADCAEG PAIGIGGPCL EDGRLMNAYW VLEGGRVSAR VFKHHLPNAE
VFDEKRVFAS GEVHGPCRVG PLRIGIPICE DSWHPDVCET LAETGAEILL VPNGSPYHRE
KLDVRVNLMV TRVVETGLPL VYLNMVGGQD DQVFDGASFV LNPHGRLMAQ LPAFEEALVH
VDFEATDEGW RALPAPIVAQ PDLWEADYHA MVLSLRDYLG KSGFSRVLLG LSGGIDSALV
AAIAADALGP EAVRCVMLPS RFTSQASLED AAAVARALGC RLDEVGIGGP QEAVGAALGP
LFEGTEPGVT EENIQSRLRG LLLMALSNKF GEMLLTTGNK SEVAVGYCTI YGDMNGGYNP
IKDLYKTRVF QMCRWRNGHH CPWMKGPEGE VIPPRVIDKP PSAELREDQK DEDSLPPYAT
LDAILEGLVD REESVAELVA RGFERETVAR IERLILGSEW KRFQSAPGTR LTRRAFWLDR
RYPMVNRWRD AGGA
|
|---|
| |