Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_1005 |
Symbol | |
ID | 4896360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 1038646 |
End bp | 1040235 |
Gene Length | 1590 bp |
Protein Length | 529 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640111591 |
Product | 2-isopropylmalate synthase |
Protein accession | YP_001042888 |
Protein GI | 126461774 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACA CGACCAAGAC CGCCTCCGAG CAGGACCGCG TCCTGATTTT CGACACCACG CTCAGGGATG GCGAACAGTC GCCCGGCGCG ACCATGACGC ATGACGAGAA GCTCGAGATC GCGGCGCTGC TCGACGAGAT GGGCGTGGAC ATCATCGAGG CGGGCTTCCC CATCGCCTCC GAGGGCGATT TCGAGGCCGT CTCGGCCATC GCGCGGCAGT CGAAGAACGC CACGATCTGC GGCCTCGCGC GGGCCAACTA CAAGGACATC GACCGCTGCT GGGAGGCGGT GCGCCACGCG AAATCCCCCC GCATCCACAC CTTCATCGGC ACCTCGCCGC TGCACCGGGC GATCCCGAAC CTCGACATGG ACCAGATGGC CGAGCGGATC CACGACACGG TGAGCCACGC CCGCAATCTC TGCGACAATG TGCAATGGTC GCCGATGGAT GCGACGCGGA CCGAGCACGA CTATCTCTGC CGCGTGGTCG AGATCGCGAT CAAGGCGGGC GCCACCACGA TCAACATCCC CGACACGGTG GGCTACACTG CCCCGCGCGA AAGCGCCGAC CTGATCCGCA TGCTCGTCGA GCGCGTGCCG GGTGCGGACA CGATCGTCTT CGCCACCCAT TGCCACAACG ATCTGGGCAT GGCGACGGCG AACGCGCTGG CGGCCGTCGA GGCGGGCGCG CGCCAGATCG AATGCACGAT CAACGGCCTC GGCGAGCGCG CGGGCAACAC CGCCCTCGAA GAGGTGGTGA TGGCGCTGAA GGTGCGCAAC GACATCATGC CGTTCCGCAC CGGCATCGAT ACGACCAAGA TCATGAACAT CAGCCGCAAG GTCGCCACCG TCTCGGGCTT CCCGGTGCAG TTCAACAAGG CCATCGTCGG CAAGAACGCC TTCGCCCACG AGTCCGGCAT CCATCAGGAC GGGATGCTGA AGAACGCCCA GACCTTCGAG ATCATGCGAC CCGCGGACGT GGGCCTCGCC GATACGTCGC TGGTGATGGG CAAGCATTCG GGCCGGGCGG CGCTGCGCGC CAAGCTCAAG GATCTGGGCT ACGATCTGGC CGACAACCAG CTGAACGACG TCTTCGTGCG GTTCAAGGCG CTCGCCGACC GCAAGAAGGA GGTCTATGAC GACGACATCG TGGCCCTGAT CCAGGATCAG GTGACCTCGG CCGAACATGA CACGCTGCAG CTCAAGCGGC TGCGCGTGGT CTGCGGCACC GACGGCCCGC AGGAGGCCGA GATGACGCTC TCGGTCGAGG GGGTGGACCA TGCCATCGAC GCGACGGGCG ACGGGCCGGT GGATGCGGCC TTCAACGCGG TGAAGATGAT CTATCCGCAC CATGCCAAGC TGCATCTCTA TCAGGTCCAT GCGGTGACCG AGGGCACCGA CGCGCAGGCG ACGGTCTCGG TCCGGCTCGA GGAGGACGGC AAGATCGCCA CGGGTCAGGC CGCCGACACC GACACGGTGG TGGCGAGCGT GAAGGCCTAT GTGAACGCGC TGAACCGCCT GATCCACCGT CGCCAGAAGT CGGCGCCGGG CGCGGACATG AAGGACGTGC ATTACAGCTC GCACGCCTGA
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Protein sequence | MTDTTKTASE QDRVLIFDTT LRDGEQSPGA TMTHDEKLEI AALLDEMGVD IIEAGFPIAS EGDFEAVSAI ARQSKNATIC GLARANYKDI DRCWEAVRHA KSPRIHTFIG TSPLHRAIPN LDMDQMAERI HDTVSHARNL CDNVQWSPMD ATRTEHDYLC RVVEIAIKAG ATTINIPDTV GYTAPRESAD LIRMLVERVP GADTIVFATH CHNDLGMATA NALAAVEAGA RQIECTINGL GERAGNTALE EVVMALKVRN DIMPFRTGID TTKIMNISRK VATVSGFPVQ FNKAIVGKNA FAHESGIHQD GMLKNAQTFE IMRPADVGLA DTSLVMGKHS GRAALRAKLK DLGYDLADNQ LNDVFVRFKA LADRKKEVYD DDIVALIQDQ VTSAEHDTLQ LKRLRVVCGT DGPQEAEMTL SVEGVDHAID ATGDGPVDAA FNAVKMIYPH HAKLHLYQVH AVTEGTDAQA TVSVRLEEDG KIATGQAADT DTVVASVKAY VNALNRLIHR RQKSAPGADM KDVHYSSHA
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