| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_0952 |
|---|
| Symbol | |
|---|
| ID | 4895758 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | - |
|---|
| Start bp | 979421 |
|---|
| End bp | 980410 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640111538 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_001042835 |
|---|
| Protein GI | 126461721 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.778848 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCCTG ACCAGCTTGT CTACGCCATG GAAGTCACCC TGAACGGCCT GATGGCCGGG
GTGATGTATG CGCTCGTGGC ACTCGGCTTC GTGCTGATCT TCAAGGCCTC GGGCATCTTC
AACTACGCAC AGGGCGTGCT CGCACTCTTT GCCGCGCTGA CGCTGGTGGG GCTGCAGAAC
GGTCAGATCC CCTTCGCCCA TCTCATCAAC GCGGCCCTCG GCACCAACCT GCACAGCTTC
GGCTGGACGC TGCCCGCGGC TCTGGCCATC GCCCTCACCG CGCTCGTGAT GGTGGGCCTC
GCCTGGGCCA TCGAGCGGCT GATCCTGAAG CATCTGGTGA ACCAGGAGCC GATCATCCTC
TTCATGGCGA CCATCGGGCT TGCCTATTTC CTCGAGGGGC TGGGCGACGT CATGTGGGGC
GCGGACATCA AGATGCTCGA CGTGGGCCTG CCGCAGGGCA TCTCGGAGGG GATCGAGGCG
GTCACGGCCG AATGGTTCGG CTACGGCTTC TTCATCGACA GGCTCGACAT CGTGGCGACG
CTGGTCGCGG CGGCGCTGGT CGCGGCGCTC ACGCTCTTCT CGCAATATAC CAAATACGGC
CGCGCGCTGC GCGCCGTGGC CGACGACCAT CAGGCGGCGC TGTCGGTCGG CATCTCGCTC
CGCTTCGTCT GGGTGCTGGT CTGGTCCATC GCGGGTTTCG TGGCCCTCAT CGCGGGCATC
ATGTGGGGGG CGAAGTCGGG CGTGCAGTTC TCGCTCTCGC TCATCGCGCT GAAGGCGCTG
CCCGTTCTCA TGCTCGGCGG CTTCACCTCG ATCCCCGGCG CCATCGTGGG CGGGCTCATC
ATCGGCATGG GCGAGAAGCT GTTCGAGTTC TTTGCGGGCC CCCTGATCGG CGGCGCAACC
GAGAACTGGT TCGCCTATGT GCTCGCACTC CTGTTCCTCG TCTTCCGGCC GCAGGGCCTG
TTCGGCGAAC GCATCATCGA GAGGGTCTGA
|
|---|
| Protein sequence | MLPDQLVYAM EVTLNGLMAG VMYALVALGF VLIFKASGIF NYAQGVLALF AALTLVGLQN
GQIPFAHLIN AALGTNLHSF GWTLPAALAI ALTALVMVGL AWAIERLILK HLVNQEPIIL
FMATIGLAYF LEGLGDVMWG ADIKMLDVGL PQGISEGIEA VTAEWFGYGF FIDRLDIVAT
LVAAALVAAL TLFSQYTKYG RALRAVADDH QAALSVGISL RFVWVLVWSI AGFVALIAGI
MWGAKSGVQF SLSLIALKAL PVLMLGGFTS IPGAIVGGLI IGMGEKLFEF FAGPLIGGAT
ENWFAYVLAL LFLVFRPQGL FGERIIERV
|
|---|
| |