Gene Rsph17029_0947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_0947 
Symbol 
ID4896481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp973686 
End bp974357 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content73% 
IMG OID640111532 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_001042830 
Protein GI126461716 
COG category[V] Defense mechanisms 
COG ID[COG3023] Negative regulator of beta-lactamase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.177704 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.768005 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCTCT CGCCCAATTG CGGGCCGCGG CGCGAGGGTG CGCGGCCCGA TCTCGTGGTG 
ATCCATTACA CGGCCATGGC CAGCGCCGAG GCCGCCCGCG TCCGCCTCTG CGATCCGGCG
GCGGAGGTTT CCGCCCACTG GCTGGTCCCG GAGCGGGGTG AGCCGTTGGC CCTGGTGCCC
GAGGAGTTGC GCGCCTGGCA CGCGGGGGCG GGGTCCTGGG GAGGCGTGAC GGATGTCAAC
TCGCGCTCGA TCGGGATCGA GCTCGCCAAT CCCGGCGACA GGCCCTTCCC CGAGCCGCAG
ATGGCGGCGC TGGAGCGGCT GCTGGCGGGG ATCCTCGCAC GGTGGCGGAT CCCGCCCGCG
CGGGTGATCG GCCATTCCGA CATGGCGCCG GAGCGGAAAT GCGATCCGGG ACTGCGCTTC
GACTGGCGCC GTCTGGCCCG CGGCGGGCTC TCGGTCTGGC CCTCGGACGG CTGTCCGCCT
GCGGAGGCGG AGACCTTTGC CGCTTCGGCC CGCGCCTTCG GCTATCCCGC CGTGGAGGCG
GAGCTTCTGC TCGCGGCGGT TCGCCTGCGG TTTAGGCCCT GGGCGCGGGG GCCGCTCACG
GGCGAGGATG CGGGGATGAT GGCCGATCTT GCGGCGCGCT ATCCGGTTGA CGGAGAGACG
TCCCAAGCGT AA
 
Protein sequence
MSLSPNCGPR REGARPDLVV IHYTAMASAE AARVRLCDPA AEVSAHWLVP ERGEPLALVP 
EELRAWHAGA GSWGGVTDVN SRSIGIELAN PGDRPFPEPQ MAALERLLAG ILARWRIPPA
RVIGHSDMAP ERKCDPGLRF DWRRLARGGL SVWPSDGCPP AEAETFAASA RAFGYPAVEA
ELLLAAVRLR FRPWARGPLT GEDAGMMADL AARYPVDGET SQA