Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_0850 |
Symbol | |
ID | 4896428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | + |
Start bp | 866129 |
End bp | 868783 |
Gene Length | 2655 bp |
Protein Length | 884 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640111435 |
Product | DNA topoisomerase I |
Protein accession | YP_001042733 |
Protein GI | 126461619 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0550] Topoisomerase IA |
TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.999873 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGTCG TCGTCGTCGA AAGCCCGGCC AAGGCCAAGA CAATCAACAA ATACCTGGGC TCCGACTATA CGGTTCTGGC CTCCTATGGC CATGTCCGCG ACCTGCCTCC CAAGGACGGA TCGGTCGATC CCGAGCATGA ATTCGCCATG ACCTGGGAGG TCGCGGCGGA TTCGAAGAAG CATGTCCGCG CCATCGCCGA CGCGCTGAAG ACCGACGACA CGCTCATTCT CGCGACCGAC CCCGACCGCG AGGGCGAGGC GATCTCGTGG CACCTGCAGG AGGCGCTGGC CTCCTCGCTG AAGAAGGGCA AGACCGTCCG CCGCGTGACC TTCAACGCCA TCACCAAATC GGCGGTGACC GAGGCGATGA AGGCCCCGCG CGAGGTCGAT ACCGCGCTGG TCGAGGCCTA TCTGGCCCGC CGGGCGCTCG ACTATCTGGT GGGCTTCACC CTCTCGCCGG TGCTGTGGCG GAAGCTGCCG GGGGCGAAAT CGGCGGGCCG GGTGCAGTCC GTGTGCCTGC GGCTCATCGT CGAGCGCGAG ATGGAGATCG AGGCCTTCCG CGCCCGCGAA TTCTGGACCG TCTCGGCGGT GCTCGCCACC CCGCGCGGGC AGGAATTCGA GGCCCGTCTG ACCGTGCTCG GCGGCAAGAA GCTCGAGAAG TTCGACCTGG CCACCTCCGA GGCGGCGGAA CTCGCCGTGC AGGCCGTGAC CTCGCGGCCG CTGAAGGTGG CCTCGGTCGA GGCCAAGCCC GCGAGCCGCA ACCCCTCGGC CCCGTTCATG ACCTCGACCC TCCAGCAGGA GGCGTCGCGC AAGTTCGGCA TGGGCGCGAA ACAGTGCATG TCGGCGGCGC AAAGGCTCTA TGAGGCTGGC CATATCACCT ACATGCGGAC CGACGGCATC GACATGGCGC CCGAGGCCGT GATGGCCGCG CGCGACGAGA TCAAGCGGCG CTTCGGGGCG AACTATGTCC CCGACAGCCC GCGCATGTAC AAGAACAAGG CCAAGAACGC GCAGGAAGCC CACGAGTGCA TCCGGCCCAC CGACATGTCG GCCTCGCCCG AGAAGCTGGG GCTGACCGAC ACCGACCAGC GCAAGCTCTA CGAGCTGATC TGGAAGCGGA CGCTGGCCAG CCAGATGGCC GCGGCGCGGC TCGAGCGGAC CACTGTCGAG ATCGCCTCGC CCGACGGGCA GGTGGGCCTG CGCGCCACGG GTCAGGTCGT GCTCTTCGAC GGCTTCCTCA AGGTCTACGA GGAGGGGCGC GACGACCGCA GCGACGGCGA CGAGGACGAT GAGGGCCGCC TGCCGCAGAT CATGGCGAAC GAGGCGGTGG AAAAGAAATG CATCACGCCC GAGCAGCACC ACACCCAGCC GCCGCCGCGC TATACCGAGG CCACGCTGGT CAAGCGGATG GAGGAGCTGG GCATCGGCCG GCCCTCGACC TATGCCAGCA TCGTCTCGAC GATCCAGGAC CGGGAATATG TCCGCAAGGA CAAGAACCGG CTGATCCCCG AGGACAAGGG GCGGCTGGTG ACGGCCTTCC TCGCGAACTT CTTCCGCAAA TATGTGGAAT ACGATTTCAC CGCCGATCTC GAGGGCGAAC TCGACGACGT CTCGGCGGGC GAGCGGAACT ACAAGGAAGT GCTCGCGCGC TTCTGGCGCG ACTTCTCGGC GGCGGTGGCC GAGACGGCCG ATCTGCGCAT CGGCGAGGTG CTCGACAAGC TCGACGATTT CCTCGCGCCC CATCTCTATC CGCCGCGGCC CGATGGGTCG GATCCGCGGA TCTGCCCGAC CTGCGGCTCG GGGCGCCTGC ATCTGAAGAC GGCGCGGGGC GGCGGGGCCT TCATCGGCTG CGGCAACTAT CCCGACTGCC GCTACACGCG GCCGATCTCG GTCACGGGCG ACGAGGAGAA TGCGATCTCG CCCGACGGCA AGCTTCTGGG CCATGACGAG GACGGCGCAC CGATCTCGCT GCGCTCGGGC CGGTTCGGGC CCTACGTCCA GAAGGGCGAG GTCACGGCCG AGGTGCCGAA ACCGCCGCGG GCGAGCCTGC CCAAGGGCTG GGCGCCCGAC ACGGTCGATC TCGACCGCGC GCTGATGCTG CTGAACCTGC CGCGCCTCGT GGGCAGCCAT CCCGAGGATG GCCAGCCGGT CGAGGCGGCC ATCGGCCGCT ATGGGCCTTA CGTCAAGCAT GGCTCGACCT ATGCGAACCT GCCGGATGTG GAGGAGGTCT TCACCATCGG CATGAACCGC GCGGTCGAGG TGCTGGCGCA GAAGGCGGCC GGCCGCCGGG GCGCCTCGGC ACCGGCGCAG CCGATCAAGG AGCTGGGCGA GCATCCCGAC GGCGGGATCC TTGCCGTGAT GCCGGGCCGC TACGGGCCCT ACGTCAAGTG GGGCAAGGTC AATGCCACGA TCCCGAAAGG GATCGAGCCC GAGGCGATCA CGCTCGAGGA AGCTCTGGCG CTGGTGGCCG AGAAGGCCGG CAAGGCGCCG AAGAAGAAGG CGCCCGCCCG GAAGGCCAAG GCCGAGGAGG GGGCGCCGAA GAAGGCCGCG CCCAAGAAGG CCGCCGCCAA GACGACCAAG ACGGCTGCCA AGAAGCCGGC TGCATCGAAA TCCACCGCCA AGAAGAAGGC GGCGCCGGAT ACCGACGCCG CCTGA
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Protein sequence | MAVVVVESPA KAKTINKYLG SDYTVLASYG HVRDLPPKDG SVDPEHEFAM TWEVAADSKK HVRAIADALK TDDTLILATD PDREGEAISW HLQEALASSL KKGKTVRRVT FNAITKSAVT EAMKAPREVD TALVEAYLAR RALDYLVGFT LSPVLWRKLP GAKSAGRVQS VCLRLIVERE MEIEAFRARE FWTVSAVLAT PRGQEFEARL TVLGGKKLEK FDLATSEAAE LAVQAVTSRP LKVASVEAKP ASRNPSAPFM TSTLQQEASR KFGMGAKQCM SAAQRLYEAG HITYMRTDGI DMAPEAVMAA RDEIKRRFGA NYVPDSPRMY KNKAKNAQEA HECIRPTDMS ASPEKLGLTD TDQRKLYELI WKRTLASQMA AARLERTTVE IASPDGQVGL RATGQVVLFD GFLKVYEEGR DDRSDGDEDD EGRLPQIMAN EAVEKKCITP EQHHTQPPPR YTEATLVKRM EELGIGRPST YASIVSTIQD REYVRKDKNR LIPEDKGRLV TAFLANFFRK YVEYDFTADL EGELDDVSAG ERNYKEVLAR FWRDFSAAVA ETADLRIGEV LDKLDDFLAP HLYPPRPDGS DPRICPTCGS GRLHLKTARG GGAFIGCGNY PDCRYTRPIS VTGDEENAIS PDGKLLGHDE DGAPISLRSG RFGPYVQKGE VTAEVPKPPR ASLPKGWAPD TVDLDRALML LNLPRLVGSH PEDGQPVEAA IGRYGPYVKH GSTYANLPDV EEVFTIGMNR AVEVLAQKAA GRRGASAPAQ PIKELGEHPD GGILAVMPGR YGPYVKWGKV NATIPKGIEP EAITLEEALA LVAEKAGKAP KKKAPARKAK AEEGAPKKAA PKKAAAKTTK TAAKKPAASK STAKKKAAPD TDAA
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