Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_0797 |
Symbol | |
ID | 4896368 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 806861 |
End bp | 807559 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640111381 |
Product | methionine synthase |
Protein accession | YP_001042680 |
Protein GI | 126461566 |
COG category | [R] General function prediction only |
COG ID | [COG5012] Predicted cobalamin binding protein |
TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.310628 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.286279 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTGACG ACGAAGAGAT CATCCTGTCC GAACTCGATG ACGAGGAGCT CGTGCTGCAG ATGCACGACG ACCTCTATGA CGGGATGAAG GACGAGATCG AGGAGGGGGT GAACATCCTC ATCGAGCGCG GCTGGACCCC CTACGACGTG CTGACGAAGG CCCTCGTGTC GGGCATGACC ATCGTGGGCA ACGACTTCCG CGACGGCATC CTCTTCGTGC CGGAGGTGCT GCTCGCCGCG AACGCCATGA AGGCGGGCAT GACGATCCTG AAGCCGCTTC TGGTCGAGAC CGGGGCGCCG CGGATGGGCA AGATGGTGAT CGGCACCGTC AAGGGCGACA TCCACGACAT CGGCAAGAAC CTCGTCGCCA TGATGATGGA GGGCGCGGGC TTCGAGGTGG TGGATCTCGG CATCAACAAC CCAGTCGAGA AATATCTCGA GGCGCTGGAG ACCGAGAAGC CCGACATCCT CGGCATGTCG GCGCTGCTGA CCACCACGAT GCCCTACATG AAGGTCGTGA TCGACACGAT GAAGGAAAAG GGCGTGCGCG ACGACTATAT CGTGCTTGTG GGCGGCGCGC CGCTGAACGA GGAGTTCGGC CGCGCCATCG GGGCGGATGC CTATTGCCGC GACGCGGCGG TGGCGGTCGA GACGGCCAAG GTGCAGGTCG CGCGGCGTCA CAACCGTCTG AACGCCTGA
|
Protein sequence | MADDEEIILS ELDDEELVLQ MHDDLYDGMK DEIEEGVNIL IERGWTPYDV LTKALVSGMT IVGNDFRDGI LFVPEVLLAA NAMKAGMTIL KPLLVETGAP RMGKMVIGTV KGDIHDIGKN LVAMMMEGAG FEVVDLGINN PVEKYLEALE TEKPDILGMS ALLTTTMPYM KVVIDTMKEK GVRDDYIVLV GGAPLNEEFG RAIGADAYCR DAAVAVETAK VQVARRHNRL NA
|
| |