| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_0776 |
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| Symbol | |
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| ID | 4896160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | + |
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| Start bp | 783882 |
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| End bp | 785315 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640111360 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase |
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| Protein accession | YP_001042659 |
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| Protein GI | 126461545 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.99015 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCCC TCTGGACCTC CGACGAGGCC GCCGCCGCGA CCGGCGGTTG CGCCACGCGC
GCCTTCGCCG CCACAGGCGT CTCGATCGAC ACCCGCAGCC TCGGGCCGGG CGACCTCTTC
GTGGCGCTCG CCGACCAGCG CGACGGCCAT GCCTTCGTGG CAGAGGCGCT GGCCCGTGGC
GCCGCCGCGG CGCTGGTCTC GCGCCGCCCG GAAGGCCTCC CCGAGGATGC GCCGCTCCTT
CTCGTGCCCG ATGTGCTCGA AGGGCTCCGC GCGCTCGGCC GCGCGGCCCG CGCCCGGACC
CGCGCCCGCG TCGTGGGCGT GACGGGCTCG GTCGGCAAGA CCTCGACCAA GGAGATGCTG
CGCGCCACGC TCGGCGGGCA GGGCACCGTC CATGCCGCCG AGGCCTCCTA CAACAACCAC
TGGGGCGTGC CGCTCACGCT GGCGCGGATG CCCGCCGACG TGGATTTCGC CGTCGTCGAG
ATCGGCATGA ACCATCCGGG CGAGATCGCC CCGCTGTCGC GCCTCGCCCG GCCGCATCTG
GCCCTCATCA CCACCGTGGC CGCGGCCCAT CTCGAGGCCT TCGACAGCCT TGCCGCCATT
GCCGAGGAGA AGGCCGCGAT CCTCGAGGGG CTCGAGCCGG CCGGGCGCGC GATCCTGCCC
GCCGGGCTCG AGGTGTCGCC GGTGCTCGCA GCCCGCGCCG CGGCGCTGGG CGTGCCGGCC
GTGACCTTCG GCCAGACGGC CGACGCCGAC TGGCGCCTCG CCGACATCCA GATCACCCCC
GAGGCCACCG TCGCGCGGGC GAGCCATGCC GGCGGAACCT TCCTCTTCAA GGTGCTGACG
CCGGGCCGGC ATTTCGCCTC GAACGCGCTC GCCACTCTGG CCGCGGCCGA GGCGCTCGGG
CTCGATCTCA CCATCGCCGC CTGCGACTTG GGTCTCTGGA CGCCGCCCTC GGGCCGCGGC
ACGCGCGAGC GCATCGCGCT CGACCCGGTG GACGAGGCAG GCTTCGACCT GATCGACGAT
GCCTTCAACG CCAATCCCGC CTCGATGGCG GCGAGCCTCG AGCTTCTGGC CGCGATGGCG
CCCACCGACG GGATCGGGCG GATCGCCGCC GGCCGCCGCA TCGCCATCCT CGGCGACATG
CTCGAGCTCG GGCCCACCGA GGCAGAGCTG CATCGTGCGG TGGCCGACCA TCCCGCCCTG
GCCGAGATCG CCCTCGTTCA CTGCGTGGGC CCCCGGATGC GGGCGCTCCA CGAGGCGCTG
CCGCGCCGCC AGCGCGGCGA ATGGGTCGAG ACCGCAGCCG AGCTCGTGCC GCGGGCCCGT
CTCCTGGTCG ATGCGGGCGA CATCGTGCTG GTGAAGGGCT CGAAAGGGAT CAAGGTCAGC
CTGGTGGTTG ACGCGCTCCG CAAACTGGGC CAGTCGAGCC CATCCAGGAC CTGA
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| Protein sequence | MTPLWTSDEA AAATGGCATR AFAATGVSID TRSLGPGDLF VALADQRDGH AFVAEALARG
AAAALVSRRP EGLPEDAPLL LVPDVLEGLR ALGRAARART RARVVGVTGS VGKTSTKEML
RATLGGQGTV HAAEASYNNH WGVPLTLARM PADVDFAVVE IGMNHPGEIA PLSRLARPHL
ALITTVAAAH LEAFDSLAAI AEEKAAILEG LEPAGRAILP AGLEVSPVLA ARAAALGVPA
VTFGQTADAD WRLADIQITP EATVARASHA GGTFLFKVLT PGRHFASNAL ATLAAAEALG
LDLTIAACDL GLWTPPSGRG TRERIALDPV DEAGFDLIDD AFNANPASMA ASLELLAAMA
PTDGIGRIAA GRRIAILGDM LELGPTEAEL HRAVADHPAL AEIALVHCVG PRMRALHEAL
PRRQRGEWVE TAAELVPRAR LLVDAGDIVL VKGSKGIKVS LVVDALRKLG QSSPSRT
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