| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_0716 |
|---|
| Symbol | |
|---|
| ID | 4895622 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | + |
|---|
| Start bp | 727579 |
|---|
| End bp | 729561 |
|---|
| Gene Length | 1983 bp |
|---|
| Protein Length | 660 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 640111300 |
|---|
| Product | AsmA family protein |
|---|
| Protein accession | YP_001042601 |
|---|
| Protein GI | 126461487 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.194292 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTGGC TGGTCCGTCT GGCGGCTGTG CTCTTCGGGC TCGCGGCCCT GTTCCTCGTG
GCCCTCGTGC TGATCCCCCG CGAGCGGGTG GCAGAGCTTG CGGCCCGCGA GTTCGAGGCC
GCGACCGGCC GAGACCTGAC GATTTCGGGC GATGTGCGGC CCTCGATCTG GCCGCGCCTC
GGCGTGCGCA CGGGGCCTGT CACCGTGGCC AACGCGCCCT GGACCGACGA GGGGCCGATG
CTCGAGGCGC GCTCGCTCGA GATCGGGCTC GATACGCTCG CGCTGATGAG TGGCGCCTGG
CGCATCAGCC GGATCGCGCT CGAGGAGCCG GTGATCCGGC TCGAACGGGA TGCGGAGGGC
CGGGCCAATT GGGATCTCTC GTCCCCGCCG CGCGGGGCGG AGGGCCGCGC CGCCGAAGGC
CGAGCCAGCC CGGCGCCGGC CTCGGCCCAG GCGGGCTTTC CGCTCTTCTC GCTCGACGAG
GGGCTGGTCA CCGGGGGACG CGTGCTCTGG ATCGACCGGG CGGCGGGCAC CCGCACCGAG
ATCTCGGGGC TCGACCTGCG CGTGAGCCTT CCCGAAGCGG GCGGGCCTGC GGATCTCACC
CTCTCCGGAC AGGCGAACGG CCACGGCTTT GCCGTCGAGG GGCGGCTCGC CGAGGCGGGC
ACGAGCCTTG CCGGCCGCGT GGCGCCGGTG CGCCTGTCGC TGGTCACGGG CGCGGCCCGG
ATCGGCTTCG ACGGCGAAGC GGGCAGCGCT CCGCCCATGG CCGAGGGCAC CATCGACGCG
GCCCTCGGCG ATCTGGGCGA TCTGGCGGCG CTCTTCGGCC AGGACCGCCC GGCCTTGCCC
GAGGGGCTGG GCCGGCGCCA GATCGCTCTC ACGGGCGGGC TTACGCTGGC CGAAGGCGGC
ACGCTCCATC TGCGGAACGG GCAGGTGACG GCCGACGGCA ACCGTCTGGC CGTCGAGGCG
GACCTGATCC CGCAGGGCGA GCGTCCGAAG CTCGAGGCGA ACCTGCGCGC CGAGACGCTG
AACCTCGCGA GCCTTTCCGC CGGTGGCGGC GGCACGGGCG GCGGAGGCGG CGCAGGCAAG
GGCTGGTCGC GCCAGCCCAT CGATGTGAGT GCGCTGTCGG CGCTCGATCT GGGCCTTGCG
CTCTCGGCGG GAAGCGTCGA TTTCGGCCGG CTGAAGCTCG GGGCCACGAA GGCGATCCTG
ACGCTCGACC GGGCCCGCCT CGTGGCCGAC CTGCGCGAGG TCGCGGCCTA TGGCGGCACA
CTCTCGGGCG AGCTGATCGT GAACGGCCGG CAGGGGCTGT CGGTCGGTGC GGACCTCACC
CTCACGGGCC TGCAGACCGA GCCGTTCCTC GGCGATCTGG CGGATTTCGA CCGGCTCGCC
ACGCAGGGCG ACCTGCGGCT GAAGCTGCTG GCCGCGGGCC CGCACGAGGA GGCGCTGATG
CAGAGCCTCT CGGGCACGGG GTCCGTCCGG TTCGGCAAGG GCGAGCTGCG CGGGCTCGAC
ATCGCGCGGA TGGTGCGGAC CCTCGACGCG GGCTCGGTGG GGCAGGGGAC CCGGACGATC
TTCGACCGCA TGGGCGCGAG CTTCACCCTC GAGAAGGGCG TGCTGCGGAA CGAGGATCTG
ACGCTCGAGG CGCCGCTGAT GCGCGCCACC GGCAAGGGAC AGGTGGGGAT CGGCGCGCGG
ACGCTCGACT ATCGGCTGCT GCCCACGCTC CTGCCGCAGG CCGACGGCAC CGGCGGGGTG
AGCGTGCCGC TCCTCGTCTC CGGCCCCTGG GCCAGCCCGC GCTACCGGCT GGATCTCGAT
GCGCTGGTGC GCCAGCCCGT GGGGCAAAAG GTGAAGGAGC GGCTGGAAGA GGAAGCGGCC
GAGCGTCTGG GCGTGGTGCC GGAGGAGGGC GAGAGCCTCG AGGAGGCCGC CAAGCGCCGC
GCCCGCGAGG CCCTGCAGGG CGAGGCCGGA CGGGCCCTCA ACCGGCTTCT CGGCGGCAAC
TGA
|
|---|
| Protein sequence | MRWLVRLAAV LFGLAALFLV ALVLIPRERV AELAAREFEA ATGRDLTISG DVRPSIWPRL
GVRTGPVTVA NAPWTDEGPM LEARSLEIGL DTLALMSGAW RISRIALEEP VIRLERDAEG
RANWDLSSPP RGAEGRAAEG RASPAPASAQ AGFPLFSLDE GLVTGGRVLW IDRAAGTRTE
ISGLDLRVSL PEAGGPADLT LSGQANGHGF AVEGRLAEAG TSLAGRVAPV RLSLVTGAAR
IGFDGEAGSA PPMAEGTIDA ALGDLGDLAA LFGQDRPALP EGLGRRQIAL TGGLTLAEGG
TLHLRNGQVT ADGNRLAVEA DLIPQGERPK LEANLRAETL NLASLSAGGG GTGGGGGAGK
GWSRQPIDVS ALSALDLGLA LSAGSVDFGR LKLGATKAIL TLDRARLVAD LREVAAYGGT
LSGELIVNGR QGLSVGADLT LTGLQTEPFL GDLADFDRLA TQGDLRLKLL AAGPHEEALM
QSLSGTGSVR FGKGELRGLD IARMVRTLDA GSVGQGTRTI FDRMGASFTL EKGVLRNEDL
TLEAPLMRAT GKGQVGIGAR TLDYRLLPTL LPQADGTGGV SVPLLVSGPW ASPRYRLDLD
ALVRQPVGQK VKERLEEEAA ERLGVVPEEG ESLEEAAKRR AREALQGEAG RALNRLLGGN
|
|---|
| |