| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_0554 |
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| Symbol | |
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| ID | 4897310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | - |
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| Start bp | 580221 |
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| End bp | 581678 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640111139 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001042442 |
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| Protein GI | 126461328 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCTCGC GTTATCGCAA GTCGCCCGAC GGGCCGAAGA CTGCGCCCTC GGCGGCGGTG
GGGGCGGCGA CGCCCTCGGT CACGGCCCCC GCCGCGCCTG CGCCGGCCAG GCCCGCGGCC
CCGCCCCGCC CGGGGCCCGC GGCGCCGCGC ACGGGCGCCG AGGCGATCGC CAGCGACAAG
GAGAAGAAGC GCAAGGAACG GCTGATGGAG CTCAAGGTCG AGCTGCACCG CCGGCTGCTC
GACGACCTCA ACCTTGCCGC CCTCGAAACC GCCTCGGAAT CGAGCCTGCG GAGCGAGATC
GCGGCCATCT GCGGCGAGGC GCTCGAGGAG ATGAGCGTCG TTCTGAACAA GGACGAACGC
GCGATCCTCA ATCAGGAGCT CTACGACGAG GTGATGGGCC TCGGCCCGCT CGAACCGCTC
CTGAAGGATG AGACGATCAA CGACATCCTC GTGAATGGCC CCTACCGGAT CTTCGTTGAG
CGGGGCGGCA AGCTCGAGCT GACCGACACG ACCTTCAAGG ACGAGCGCCA CCTCCTGCGG
ATCATCGACA AGATCGTCTC GGCGGTGGGC CGGCGGGTGG ACGAATCGAC CCCTTACGTC
GACGCGCGTC TGGCCGACGG GTCGCGCTTC AACGCCATGG TGCCGCCCAT CGCGGTTGAC
GGCTCGCTCG TCTCGATCCG GAAGTTCAAG AAGGACAAGC TCGGCATCGC CGATCTCGTG
CGCTTCGGCG CCTTCACCGA GGAGATGGCG GCCTACCTTC AGGCCGCCGT GGCCACGCGG
CTCAACATCA TCGTCTCGGG CGGCACCGGC TCGGGCAAGA CCACGACGCT GAACGCGCTG
TCGTCCTTCA TCGACGATTC CGAGCGGATC CTGACCATCG AGGATACGGC CGAGCTCCAG
CTGCAGCAGG CCCATGTCGG CCGGATGGAG AGTCGGCCCC CGAACGTCGA GGGCAAGGGC
GCGGTGACGC AGCGCGACTG TCTGAGGAAC GCGCTGCGGA TGCGGCCCGA CCGGATCATC
GTGGGCGAGA CCCGCGGCGA GGAGGTCATC GACATGCTGC AGGCGATGAA CACCGGCCAC
GACGGCTCCA TGACCACGAT CCACGCCAAC TCCGCGCGCG ACGGCATCAG CCGGCTAGAG
AACATGGTGG CGATGGCCGG GATCGAGATG CCGATCAAGG CGGTGCGCGC GCAGATCGCC
TCGGCCGTCA ACCTGATCGT GCAGGCCAGC CGCCTGCAGG ACGGCTCGCG CCGGATGGTC
TCGATCACCG AGATCACCGG AATGGAGGGC GACGTCATCT CGATGCAGGA GATCTTCCGC
TACGAGCGGC TGGGGGTCGA GCCGTCGGGC AAGATCATCG GCCGGTTCAA TGCGACGGGC
GTGCGCTCGC ACTATTCCGA CCGCTTCCGC CAGTGGGGCT ACATCCTGCC CGCCACCATC
TACGACCCCA TTCCCTGA
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| Protein sequence | MFSRYRKSPD GPKTAPSAAV GAATPSVTAP AAPAPARPAA PPRPGPAAPR TGAEAIASDK
EKKRKERLME LKVELHRRLL DDLNLAALET ASESSLRSEI AAICGEALEE MSVVLNKDER
AILNQELYDE VMGLGPLEPL LKDETINDIL VNGPYRIFVE RGGKLELTDT TFKDERHLLR
IIDKIVSAVG RRVDESTPYV DARLADGSRF NAMVPPIAVD GSLVSIRKFK KDKLGIADLV
RFGAFTEEMA AYLQAAVATR LNIIVSGGTG SGKTTTLNAL SSFIDDSERI LTIEDTAELQ
LQQAHVGRME SRPPNVEGKG AVTQRDCLRN ALRMRPDRII VGETRGEEVI DMLQAMNTGH
DGSMTTIHAN SARDGISRLE NMVAMAGIEM PIKAVRAQIA SAVNLIVQAS RLQDGSRRMV
SITEITGMEG DVISMQEIFR YERLGVEPSG KIIGRFNATG VRSHYSDRFR QWGYILPATI
YDPIP
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